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Evaluation of Whole Genome Sequencing for Outbreak Detection of Salmonella enterica

Figure 1

WGS typing results for the set of 34 genomes.

(A) pan-genome tree, (B) K-mer tree, (C) nucleotide difference tree and (D) SNP tree. The tested set consists of outbreak-related strains displayed with color label and non-related outbreak strains shown without coloring. The outbreak strains were labeled according to the six different outbreak sources.

Figure 1

doi: https://doi.org/10.1371/journal.pone.0087991.g001