Evaluation of Whole Genome Sequencing for Outbreak Detection of Salmonella enterica
Figure 1
WGS typing results for the set of 34 genomes.
(A) pan-genome tree, (B) K-mer tree, (C) nucleotide difference tree and (D) SNP tree. The tested set consists of outbreak-related strains displayed with color label and non-related outbreak strains shown without coloring. The outbreak strains were labeled according to the six different outbreak sources.