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Gitools: Analysis and Visualisation of Genomic Data Using Interactive Heat-Maps

Figure 1

Main steps and features of Gitools.

In the first step the data to be analyzed or visualized is prepared. This can be done by opening files that have been prepared externally or by importing the data from IntOGen, Biomart, Gene Ontology or KEGG databases. In the second step the user chooses which analysis to perform: enrichment, oncodrive, combination of p-values, correlations and overlaps. The parameters for the analysis are prompted using graphical wizards. In the third step the results are browsed and arranged in order to retrieve relevant information. In the fourth step the results are exported to tables, images and html.

Figure 1

doi: https://doi.org/10.1371/journal.pone.0019541.g001