Table S4. Genes Clustered in PAM analysis (Fig 5C and Fig S3) 1.5-fold change p < 0.01 ANOVA Benjamini and Hochberg Condition 1: sh-control Condition 2 : sh-control + aza Condition 3 : sh-3B Condition 4 : sh-3B + aza Cluster 1 Cluster 1 Cluster 2 Cluster 2 Cluster 3 Cluster 3 Cluster 4 Cluster 4 Cluster 5 Cluster 5 Cluster 6 Cluster 6 "Discs, large homolog 3 (Drosophila)" DLG3 Chromosome 1 open reading frame 86 C1orf86 Zinc finger protein 337 ZNF337 Left-right determination factor 2 LEFTY2 EFR3 homolog B (S. cerevisiae) EFR3B Ras interacting protein 1 RASIP1 "CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like" CTDSPL Arylformamidase AFMID Basic leucine zipper nuclear factor 1 BLZF1 Tumor protein p53 TP53 "Diacylglycerol kinase, theta 110kDa" DGKQ Pellino homolog 1 (Drosophila) PELI1 Tetratricopeptide repeat domain 31 TTC31 Interleukin 17 receptor B IL17RB NOP58 ribonucleoprotein homolog (yeast) NOP58 "Proliferation-associated 2G4, 38kDa" PA2G4 Ecotropic viral integration site 5-like EVI5L "Histone cluster 4, H4" HIST4H4 "Integrin, beta 5" ITGB5 Chromosome 6 open reading frame 153 C6orf153 "Neurofilament, heavy polypeptide" NEFH Hematopoietic cell-specific Lyn substrate 1 HCLS1 Serine/threonine kinase 40 STK40 Copper metabolism (Murr1) domain containing 1 COMMD1 "PREDICTED: hypothetical protein LOC642945, transcript variant 2 (LOC642946), mRNA." - DPH2 homolog (S. cerevisiae) DPH2 Asparagine synthetase domain containing 1 ASNSD1 "PREDICTED: phosphoglycerate mutase family member 5 (PGAM5), mRNA." - FGGY carbohydrate kinase domain containing FGGY KIAA0146 KIAA0146 INO80 complex subunit E INO80E Mitochondrial carrier triple repeat 1 MCART1 Nuclear RNA export factor 1 NXF1 "Tumor necrosis factor receptor superfamily, member 13B" TNFRSF13B Unc-84 homolog B (C. elegans) UNC84B Chromosome 4 open reading frame 34 C4orf34 Rho family GTPase 2 RND2 "Ras homolog gene family, member C" RHOC "Family with sequence similarity 175, member B" FAM175B Metallothionein 1G MT1G DNA (cytosine-5-)-methyltransferase 3 beta DNMT3B "PREDICTED: hypothetical protein LOC645580 (FLJ37453), mRNA." - MAD2 mitotic arrest deficient-like 2 (yeast) MAD2L2 Chromosome 16 open reading frame 48 C16orf48 FAST kinase domains 3 FASTKD3 "UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)" UTP14A Insulin-like growth factor 2 receptor IGF2R "Arrestin, beta 1" ARRB1 "Reticulocalbin 2, EF-hand calcium binding domain" RCN2 Paternally expressed 3 PEG3 Four and a half LIM domains 2 FHL2 FIP1 like 1 (S. cerevisiae) FIP1L1 Galanin prepropeptide GAL Unc-13 homolog B (C. elegans) UNC13B Transaldolase 1 TALDO1 Limb bud and heart development homolog (mouse) LBH Chromosome 9 open reading frame 6 C9orf6 Programmed cell death 2 PDCD2 "G-protein signaling modulator 2 (AGS3-like, C. elegans)" GPSM2 Kinesin family member 13B KIF13B Cytidine deaminase CDA Phosphoprotein enriched in astrocytes 15 PEA15 Leucine zipper protein 1 LUZP1 "Eukaryotic translation initiation factor 4 gamma, 2" EIF4G2 Leprecan-like 1 LEPREL1 "Sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D" SEMA4D Prostaglandin E synthase 3 (cytosolic) PTGES3 G protein-coupled receptor 177 GPR177 Programmed cell death 5 PDCD5 Brix domain containing 2 BXDC2 "PREDICTED: hypothetical protein LOC730525 (LOC730525), mRNA." - "UDP glycosyltransferase 3 family, polypeptide A2" UGT3A2 Hydroxysteroid (17-beta) dehydrogenase 4 HSD17B4 Connective tissue growth factor CTGF "PREDICTED: hypothetical LOC400879, transcript variant 2 (LOC400879), mRNA." - Mortality factor 4 like 2 MORF4L2 Leucine rich repeat containing 26 LRRC26 Chromosome 6 open reading frame 221 C6orf221 chromosome 12 open reading frame 32 - Cell division cycle 37 homolog (S. cerevisiae) CDC37 PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) PRPF40A SMAD family member 7 SMAD7 Leucine rich repeat containing 20 LRRC20 Peroxisomal biogenesis factor 7 PEX7 Pim-2 oncogene PIM2 Exportin 5 XPO5 NOP56 ribonucleoprotein homolog (yeast) NOP56 Left-right determination factor 1 LEFTY1 Adrenomedullin 2 ADM2 Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like MTHFD1L Ubiquitin specific peptidase 44 USP44 "Leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3" LILRB3 "DnaJ (Hsp40) homolog, subfamily C, member 9" DNAJC9 High-mobility group box 1-like 1 HMGB1L1 DNA (cytosine-5-)-methyltransferase 3 beta DNMT3B Tryptophanyl-tRNA synthetase WARS Arginine-glutamic acid dipeptide (RE) repeats RERE G protein-coupled receptor 177 GPR177 "C-myc-P64 mRNA, initiating from promoter P0, (HLmyc3.1) partial cds" - Nuclear receptor coactivator 5 NCOA5 X-box binding protein 1 XBP1 Junctophilin 3 JPH3 Lysosomal protein transmembrane 4 beta LAPTM4B "Cadherin 2, type 1, N-cadherin (neuronal)" CDH2 Anaphase promoting complex subunit 13 ANAPC13 APEX nuclease (multifunctional DNA repair enzyme) 1 APEX1 SH3-domain kinase binding protein 1 SH3KBP1 Adenylate cyclase 1 (brain) ADCY1 "Proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)" PSME1 Ezrin EZR Dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 DYRK2 Ribosomal protein L6 RPL6 "Guanine nucleotide binding protein (G protein), gamma 7" GNG7 Checkpoint with forkhead and ring finger domains CHFR Adenylate kinase 3-like 1 AK3L1 "Sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1" SULT1A1 Carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) CEACAM1 "UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)" UTP14A "Solute carrier family 27 (fatty acid transporter), member 1" SLC27A1 Nudix (nucleoside diphosphate linked moiety X)-type motif 14 NUDT14 "PREDICTED: hypothetical LOC642817 (LOC642817), mRNA." - "Lectin, galactoside-binding, soluble, 7" LGALS7 RNA binding motif protein 22 RBM22 NOP56 ribonucleoprotein homolog (yeast) NOP56 "PREDICTED: similar to Ankyrin repeat domain protein 11 (Ankyrin repeat-containing cofactor 1) (LOC653103), mRNA." - "Acyl-Coenzyme A dehydrogenase family, member 10" ACAD10 CD24 molecule CD24 Coiled-coil domain containing 85C CCDC85C "Bromodomain and PHD finger containing, 1" BRPF1 "PREDICTED: similar to 60 kDa heat shock protein, mitochondrial precursor (Hsp60) (60 kDa chaperonin) (CPN60) (Heat shock protein 60) (HSP-60) (Mitochondrial matrix protein P1) (P60 lymphocyte protein) (HuCHA60) (LOC643300), mRNA." - "Solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2" SLC3A2 Visinin-like 1 VSNL1 "Protein disulfide isomerase family A, member 6" PDIA6 "Proteasome (prosome, macropain) 26S subunit, ATPase, 1" PSMC1 "C-myc-P64 mRNA, initiating from promoter P0, (HLmyc3.1) partial cds" - Heat shock 70kDa protein 8 HSPA8 Early growth response 1 EGR1 Myosin IXA MYO9A "ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d" ATP5H GLE1 RNA export mediator homolog (yeast) GLE1 RNA methyltransferase like 1 RNMTL1 Nucleolar and coiled-body phosphoprotein 1 NOLC1 Ubiquitin-conjugating enzyme E2L 3 UBE2L3 Vesicle-associated membrane protein 1 (synaptobrevin 1) VAMP1 Polyhomeotic homolog 1 (Drosophila) PHC1 "Cystinosis, nephropathic" CTNS Ankyrin repeat and SOCS box-containing 9 ASB9 Polymerase (RNA) mitochondrial (DNA directed) POLRMT Carbonic anhydrase IV CA4 Phosphatidylethanolamine N-methyltransferase PEMT Intraflagellar transport 52 homolog (Chlamydomonas) IFT52 Elastin microfibril interfacer 2 EMILIN2 "Small nucleolar RNA, C/D box 15B" SNORD15B "Lectin, galactoside-binding, soluble, 3 binding protein" LGALS3BP "Histone cluster 1, H2bk" HIST1H2BK Hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 HERC1 Abhydrolase domain containing 12B ABHD12B Chromosome 8 open reading frame 37 C8orf37 Interferon gamma receptor 1 IFNGR1 "Glutamate decarboxylase 1 (brain, 67kDa)" GAD1 "Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase" MTHFD2 Cystatin SN CST1 "Ash2 (absent, small, or homeotic)-like (Drosophila)" ASH2L "Potassium voltage-gated channel, subfamily H (eag-related), member 6" KCNH6 "TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)" TSR1 Guanine nucleotide binding protein-like 3 (nucleolar) GNL3 "Histone cluster 2, H2aa3" HIST2H2AA3 Kinesin family member 1A KIF1A Serine incorporator 2 SERINC2 "WD repeat containing, antisense to TP53" WRAP53 Guanine nucleotide binding protein-like 3 (nucleolar)-like GNL3L Mannose-6-phosphate receptor (cation dependent) M6PR Leucine proline-enriched proteoglycan (leprecan) 1 LEPRE1 LIM domain binding 2 LDB2 "Tubulin, beta 4" TUBB4 "Pleckstrin homology domain containing, family F (with FYVE domain) member 1" PLEKHF1 Bromodomain containing 8 BRD8 "small nucleolar RNA, C/D box 31" - Unc-5 homolog A (C. elegans) UNC5A Non-SMC element 1 homolog (S. cerevisiae) NSMCE1 Sp8 transcription factor SP8 G protein-coupled receptor 162 GPR162 Heat shock 105kDa/110kDa protein 1 HSPH1 Glypican 4 GPC4 "N-acetylglucosaminidase, alpha-" NAGLU "Excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequenc" ERCC1 "DA728582 NT2RM2 cDNA clone NT2RM2002174 5, mRNA sequence" - "Solute carrier family 7 (cationic amino acid transporter, y+ system), member 5" SLC7A5 sideroflexin 4 - MYC-associated zinc finger protein (purine-binding transcription factor) MAZ Tribbles homolog 3 (Drosophila) TRIB3 Zinc finger and BTB domain containing 46 ZBTB46 Tyrosylprotein sulfotransferase 2 TPST2 Suppressor of cytokine signaling 2 SOCS2 BCL2-associated athanogene 3 BAG3 "Casein kinase 2, alpha 1 polypeptide" CSNK2A1 "Cytochrome P450, family 2, subfamily F, polypeptide 1" CYP2F1 Secreted frizzled-related protein 2 SFRP2 "PREDICTED: similar to Tubulin alpha-2 chain (Alpha-tubulin 2), transcript variant 5 (LOC399942), mRNA." - "Adaptor-related protein complex 3, mu 2 subunit" AP3M2 Calcium binding tyrosine-(Y)-phosphorylation regulated CABYR "Chaperonin containing TCP1, subunit 2 (beta)" CCT2 Transmembrane protein 145 TMEM145 "PREDICTED: similar to cis-Golgi matrix protein GM130, transcript variant 2 (LOC653344), mRNA." - X-box binding protein 1 XBP1 Chymotrypsin-like CTRL "Dynein, light chain, LC8-type 2" DYNLL2 Ly1 antibody reactive homolog (mouse) LYAR "Alkaline phosphatase, liver/bone/kidney" ALPL "PREDICTED: inositol polyphosphate-5-phosphatase, 40kDa (INPP5A), mRNA." - Leucine rich repeat containing 47 LRRC47 "TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa" TAF15 Family with sequence similarity 123B FAM123B Nodal homolog (mouse) NODAL "Histone cluster 3, H2a" HIST3H2A "Asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)" ALG9 Microsomal glutathione S-transferase 2 MGST2 Transportin 1 TNPO1 Annexin A2 ANXA2 Chromosome 19 open reading frame 46 C19orf46 Fibulin 2 FBLN2 "Actinin, alpha 4" ACTN4 Feline sarcoma oncogene FES "Inositol 1,4,5-triphosphate receptor interacting protein" ITPRIP Methyltransferase like 13 METTL13 Ribonucleotide reductase M2 polypeptide RRM2 Methionine sulfoxide reductase B2 MSRB2 "Secretoglobin, family 3A, member 2" SCGB3A2 INO80 complex subunit D INO80D Coiled-coil domain containing 102A CCDC102A Metallothionein 1E MT1E Hypoxanthine phosphoribosyltransferase 1 HPRT1 "hypothetical protein FLJ22184 (FLJ22184), mRNA." - "Jumonji, AT rich interactive domain 2" JARID2 Farnesyl-diphosphate farnesyltransferase 1 FDFT1 "SPANX family, member D" SPANXD Ribosomal L1 domain containing 1 RSL1D1 Chromosome 12 open reading frame 11 C12orf11 "Transcription elongation factor A (SII), 2" TCEA2 "Islet cell autoantigen 1, 69kDa" ICA1 Leucine-rich repeats and immunoglobulin-like domains 1 LRIG1 "Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1" SERPINE1 Dual specificity phosphatase 5 DUSP5 "family with sequence similarity 38, member A" - Chromosome 20 open reading frame 54 C20orf54 Prostate tumor overexpressed 1 PTOV1 Neuron derived neurotrophic factor NENF Muscleblind-like 3 (Drosophila) MBNL3 hypothetical LOC441268 - RAB3A interacting protein (rabin3)-like 1 RAB3IL1 Chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1) CXCL12 SERTA domain containing 1 SERTAD1 Zinc finger protein 14 ZNF14 Oligonucleotide/oligosaccharide-binding fold containing 1 OBFC1 Carbohydrate (chondroitin 4) sulfotransferase 13 CHST13 "Succinate-CoA ligase, ADP-forming, beta subunit" SUCLA2 "Fanconi anemia, complementation group G" FANCG Sushi domain containing 2 SUSD2 Endothelial PAS domain protein 1 EPAS1 "Transient receptor potential cation channel, subfamily C, member 4 associated protein" TRPC4AP CTP synthase II CTPS2 "PREDICTED: similar to Sorbitol dehydrogenase (L-iditol 2-dehydrogenase) (LOC653381), mRNA." - "Glutamate decarboxylase 1 (brain, 67kDa)" GAD1 Protocadherin 19 PCDH19 "Protein phosphatase 2 (formerly 2A), regulatory subunit B, gamma isoform" PPP2R2C WD repeat domain 70 WDR70 Trafficking protein particle complex 2-like TRAPPC2L "Methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria" MMACHC Neuronal pentraxin II NPTX2 "SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2" SMARCA2 Tubby like protein 4 TULP4 "solute carrier family 44, member 4" - "Origin recognition complex, subunit 5-like (yeast)" ORC5L "Solute carrier family 25, member 35" SLC25A35 Dedicator of cytokinesis 1 DOCK1 peptidylprolyl isomerase A processed pseudogene - Forkhead box O3 FOXO3 "HAUS augmin-like complex, subunit 2" HAUS2 LEM domain containing 2 LEMD2 Tripartite motif family-like 2 TRIML2 "Solute carrier family 45, member 4" SLC45A4 CXXC finger 1 (PHD domain) CXXC1 Hypothetical LOC644422 LOC644422 Mediator complex subunit 30 MED30 Delta-like 3 (Drosophila) DLL3 "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1" B3GNT1 G protein-coupled receptor 177 GPR177 "Zinc finger, DHHC-type containing 6" ZDHHC6 "Solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23" SLC25A23 "Phospholipase A2, group X" PLA2G10 ADP-ribosylation-like factor 6 interacting protein 6 ARL6IP6 PRKR interacting protein 1 (IL11 inducible) PRKRIP1 PRP4 pre-mRNA processing factor 4 homolog (yeast) PRPF4 TRNA splicing endonuclease 15 homolog (S. cerevisiae) TSEN15 Stanniocalcin 2 STC2 "Apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G" APOBEC3G NFKB repressing factor NKRF Epstein-Barr virus induced 3 EBI3 Iroquois homeobox 4 IRX4 "Protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A" PTPLA GLI family zinc finger 2 GLI2 Chromosome 12 open reading frame 45 C12orf45 "Platelet-derived growth factor receptor, beta polypeptide" PDGFRB Eukaryotic elongation factor-2 kinase EEF2K Y box binding protein 2 YBX2 Chromosome 5 open reading frame 13 C5orf13 Testis expressed 10 TEX10 G-rich RNA sequence binding factor 1 GRSF1 Nipsnap homolog 1 (C. elegans) NIPSNAP1 Transmembrane protein 125 TMEM125 mature T-cell proliferation 1 - Gem (nuclear organelle) associated protein 4 GEMIN4 "Cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)" CER1 "Sushi-repeat-containing protein, X-linked" SRPX Serine hydroxymethyltransferase 2 (mitochondrial) SHMT2 SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae) SUMO3 "PREDICTED: chromosome 17 open reading frame 68 (C17orf68), mRNA." - "Polymerase (RNA) I polypeptide C, 30kDa" POLR1C "Neuroligin 4, X-linked" NLGN4X WD repeat domain 8 WDR8 Nanog homeobox NANOG K(lysine) acetyltransferase 2A KAT2A Ribonuclease P/MRP 40kDa subunit RPP40 Transmembrane protein 132D TMEM132D "Ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast)" UBE2E2 Ring finger protein 130 RNF130 Similar to hCG38149 LOC728715 Nucleoside phosphorylase NP "H2A histone family, member J" H2AFJ Collapsin response mediator protein 1 CRMP1 ATP citrate lyase ACLY CKLF-like MARVEL transmembrane domain containing 3 CMTM3 Heat shock 70kDa protein 8 HSPA8 Galanin receptor 2 GALR2 NODAL modulator 3 NOMO3 SRY (sex determining region Y)-box 2 SOX2 Retinitis pigmentosa 9 (autosomal dominant) RP9 telomerase RNA component - Vacuolar protein sorting 8 homolog (S. cerevisiae) VPS8 "Zinc finger, SWIM-type containing 4" ZSWIM4 N-acylaminoacyl-peptide hydrolase APEH Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1 Damage-regulated autophagy modulator DRAM "PREDICTED: similar to NACHT, leucine rich repeat and PYD (pyrin domain) containing 1, transcript variant 1 (LOC730994), mRNA." - Lipoma HMGIC fusion partner-like 4 LHFPL4 Forkhead box N3 FOXN3 "ATP-binding cassette, sub-family F (GCN20), member 1" ABCF1 MRNA turnover 4 homolog (S. cerevisiae) MRTO4 Phosphoenolpyruvate carboxykinase 2 (mitochondrial) PCK2 Acyl-CoA synthetase short-chain family member 2 ACSS2 Lipopolysaccharide-induced TNF factor LITAF Budding uninhibited by benzimidazoles 3 homolog (yeast) BUB3 "Solute carrier family 35, member E1" SLC35E1 Hexokinase 1 HK1 "Spondin 1, extracellular matrix protein" SPON1 7-dehydrocholesterol reductase DHCR7 G protein-coupled estrogen receptor 1 GPER double homeobox A pseudogene 3 - Phosphoglycerate dehydrogenase PHGDH Hydroxyacylglutathione hydrolase HAGH CHK2 checkpoint homolog (S. pombe) CHEK2 "UTP23, small subunit (SSU) processome component, homolog (yeast)" UTP23 "Metastasis associated 1 family, member 2" MTA2 DNA-damage-inducible transcript 4 DDIT4 "Cadherin 3, type 1, P-cadherin (placental)" CDH3 Selenophosphate synthetase 1 SEPHS1 F-box protein 6 FBXO6 Guanine nucleotide binding protein-like 2 (nucleolar) GNL2 "Histone cluster 2, H2ac" HIST2H2AC "Trafficking protein, kinesin binding 1" TRAK1 Methylcrotonoyl-Coenzyme A carboxylase 1 (alpha) MCCC1 "Hairy and enhancer of split 1, (Drosophila)" HES1 Minichromosome maintenance complex component 4 MCM4 Golgi apparatus protein 1 GLG1 ROD1 regulator of differentiation 1 (S. pombe) ROD1 Mediator complex subunit 25 MED25 calcium binding protein P22 pseudogene (LOC729603) on chromosome 6. - "NUAK family, SNF1-like kinase, 2" NUAK2 "Retinol binding protein 7, cellular" RBP7 "Protein tyrosine phosphatase, receptor type, A" PTPRA "Family with sequence similarity 162, member B" FAM162B Kruppel-like factor 6 KLF6 Zinc fingers and homeoboxes 2 ZHX2 Intersectin 1 (SH3 domain protein) ITSN1 "Serine threonine kinase 39 (STE20/SPS1 homolog, yeast)" STK39 High-mobility group box 3 HMGB3 Mucolipin 3 MCOLN3 SCO cytochrome oxidase deficient homolog 2 (yeast) SCO2 Lysosomal-associated membrane protein 2 LAMP2 Tryptophanyl-tRNA synthetase WARS Low density lipoprotein receptor-related protein 4 LRP4 TraB domain containing TRABD "N-acetyltransferase 5 (GCN5-related, putative)" NAT5 4-hydroxyphenylpyruvate dioxygenase-like HPDL Acyl-CoA thioesterase 7 ACOT7 "Spectrin, beta, non-erythrocytic 1" SPTBN1 "Eukaryotic translation initiation factor 2C, 2" EIF2C2 B cell RAG associated protein GALNAC4S-6ST Chromosome 16 open reading frame 35 C16orf35 "Interleukin 27 receptor, alpha" IL27RA Developmental pluripotency associated 2 DPPA2 "hypothetical protein LOC641737 (FLJ44124), mRNA." - Guanine nucleotide binding protein-like 3 (nucleolar) GNL3 "Brain expressed, X-linked 5" BEX5 PDZ domain containing 4 PDZD4 Developmental pluripotency associated 3 DPPA3 "phosphatidylinositol-5-phosphate 4-kinase, type II, beta" - Nucleolar protein family 6 (RNA-associated) NOL6 Phospholysine phosphohistidine inorganic pyrophosphate phosphatase LHPP "PREDICTED: chromatin modifying protein 6 (CHMP6), mRNA." - "Scavenger receptor class B, member 1" SCARB1 Fukutin FKTN Follistatin FST Asparagine synthetase ASNS "Phospholipase A2, group XVI" PLA2G16 RAB3A interacting protein (rabin3) RAB3IP keratin associated protein 21-1 - "Peroxisome proliferator-activated receptor gamma, coactivator-related 1" PPRC1 Low density lipoprotein receptor-related protein associated protein 1 LRPAP1 "Protein disulfide isomerase family A, member 5" PDIA5 Growth differentiation factor 3 GDF3 "hypothetical protein LOC642947 (LOC642947), mRNA." - Prostaglandin E synthase PTGES Ubiquitin-conjugating enzyme E2L 6 UBE2L6 "DnaJ (Hsp40) homolog, subfamily B, member 6" DNAJB6 Nuclear receptor co-repressor 2 NCOR2 SERTA domain containing 2 SERTAD2 Hypothetical protein FLJ40504 FLJ40504 Cystathionine-beta-synthase CBS Vesicle-associated membrane protein 1 (synaptobrevin 1) VAMP1 "Protein kinase (cAMP-dependent, catalytic) inhibitor beta" PKIB "Splicing factor 3a, subunit 3, 60kDa" SF3A3 Mitochondrial GTPase 1 homolog (S. cerevisiae) MTG1 "Synuclein, alpha (non A4 component of amyloid precursor)" SNCA Deoxyhypusine synthase DHPS Septin 6 6-Sep Cardiotrophin-like cytokine factor 1 CLCF1 RAE1 RNA export 1 homolog (S. pombe) RAE1 Fas (TNFRSF6)-associated via death domain FADD "General transcription factor IIIC, polypeptide 1, alpha 220kDa" GTF3C1 "Core-binding factor, runt domain, alpha subunit 2; translocated to, 2" CBFA2T2 breast cancer metastasis suppressor 1 - "Family with sequence similarity 119, member A" FAM119A GDP-mannose pyrophosphorylase A GMPPA "Odz, odd Oz/ten-m homolog 3 (Drosophila)" ODZ3 Voltage-dependent anion channel 1 VDAC1 KIAA0101 KIAA0101 Fem-1 homolog a (C. elegans) FEM1A "Cysteine conjugate-beta lyase, cytoplasmic" CCBL1 "Propionyl Coenzyme A carboxylase, beta polypeptide" PCCB Chromosome 17 open reading frame 63 C17orf63 "Serine palmitoyltransferase, long chain base subunit 1" SPTLC1 Transcribed locus - Fas (TNFRSF6) associated factor 1 FAF1 Chromosome 6 open reading frame 126 C6orf126 Single stranded DNA binding protein 3 SSBP3 TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae) TRMT1 "Catenin (cadherin-associated protein), beta 1, 88kDa" CTNNB1 Chromosome 14 open reading frame 147 C14orf147 S-adenosylhomocysteine hydrolase-like 2 AHCYL2 Receptor (G protein-coupled) activity modifying protein 2 RAMP2 Etoposide induced 2.4 mRNA EI24 "Non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)" NME6 GRAM domain containing 1A GRAMD1A Chromosome 14 open reading frame 37 C14orf37 Chromosome 1 open reading frame 172 C1orf172 PR domain containing 4 PRDM4 "DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae)" DCLRE1C Lipin 1 LPIN1 Small nuclear ribonucleoprotein polypeptide N SNRPN "DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)" DCUN1D5 Hairy and enhancer of split 2 (Drosophila) HES2 Coilin COIL "NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)" NDUFS7 Protocadherin beta 5 PCDHB5 Glycine dehydrogenase (decarboxylating) GLDC CDC-like kinase 3 CLK3 AOC3 pseudogene (LOC90586) on chromosome 17. - Interleukin 21 receptor IL21R "Adaptor-related protein complex 3, beta 1 subunit" AP3B1 "HESC3_16_C05.g1_A036 Human embryonic stem cells cDNA clone IMAGE:7476876 5, mRNA sequence" - Myoferlin MYOF Mitochondrial ribosomal protein S11 MRPS11 Breast carcinoma amplified sequence 4 BCAS4 Metastasis suppressor 1 MTSS1 Adenylate kinase 3-like 1 AK3L1 CGRP receptor component CRCP B-cell CLL/lymphoma 11A (zinc finger protein) BCL11A "Family with sequence similarity 125, member A" FAM125A Inositol(myo)-1(or 4)-monophosphatase 2 IMPA2 "Proteasome (prosome, macropain) 26S subunit, non-ATPase, 1" PSMD1 Zinc finger homeobox 3 ZFHX3 Neuron navigator 2 NAV2 "Spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)" SPTAN1 "Enoyl Coenzyme A hydratase 1, peroxisomal" ECH1 Latrophilin 1 LPHN1 Colony stimulating factor 1 receptor CSF1R Small nuclear ribonucleoprotein 25kDa (U11/U12) SNRNP25 Mitogen-activated protein kinase kinase 3 MAP2K3 Testis-specific kinase 2 TESK2 "PREDICTED: hypothetical protein LOC643272 (LOC643272), mRNA." - Ral guanine nucleotide dissociation stimulator RALGDS FOS-like antigen 1 FOSL1 "Sprouty homolog 1, antagonist of FGF signaling (Drosophila)" SPRY1 KCNE1-like KCNE1L Hydroxysteroid (17-beta) dehydrogenase 12 HSD17B12 Zinc finger protein 689 ZNF689 ADAMTS-like 2 ADAMTSL2 5-oxoprolinase (ATP-hydrolysing) OPLAH Spermidine/spermine N1-acetyltransferase 1 SAT1 Phosphatidic acid phosphatase type 2A PPAP2A Cathepsin B CTSB "Polymerase (RNA) I polypeptide C, 30kDa" POLR1C Glutamic pyruvate transaminase (alanine aminotransferase) 2 GPT2 "Prolyl 4-hydroxylase, beta polypeptide" P4HB "Apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G" APOBEC3G Hepatocyte growth factor-regulated tyrosine kinase substrate HGS NOP16 nucleolar protein homolog (yeast) NOP16 "Potassium channel, subfamily K, member 12" KCNK12 Dihydropyrimidinase-like 3 DPYSL3 Hypoxia up-regulated 1 HYOU1 "PREDICTED: similar to activating signal cointegrator 1 complex subunit 3-like 1 (LOC650909), mRNA." - Zinc finger and BTB domain containing 33 ZBTB33 Coactivator-associated arginine methyltransferase 1 CARM1 Calcyon neuron-specific vesicular protein CALY Zinc finger protein 423 ZNF423 "Zinc finger, AN1-type domain 2A" ZFAND2A Chromosome 1 open reading frame 163 C1orf163 Adenosine deaminase ADA Ets variant 5 ETV5 Clone 23700 mRNA sequence - Bone marrow stromal cell antigen 2 BST2 Breast cancer metastasis suppressor 1 BRMS1 Contactin associated protein 1 CNTNAP1 Glycoprotein M6B GPM6B HESX homeobox 1 HESX1 "GA binding protein transcription factor, beta subunit 2" GABPB2 GLI pathogenesis-related 1 like 1 GLIPR1L1 "NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)" NDUFS4 Patatin-like phospholipase domain containing 6 PNPLA6 Secretory carrier membrane protein 5 SCAMP5 Runt-related transcription factor 3 RUNX3 Sideroflexin 4 SFXN4 DNA (cytosine-5-)-methyltransferase 3 beta DNMT3B COMM domain containing 7 COMMD7 Chromosome 10 open reading frame 76 C10orf76 Rho guanine nucleotide exchange factor (GEF) 19 ARHGEF19 "PREDICTED: hypothetical LOC644743 (LOC644743), mRNA." - T-cell leukemia/lymphoma 1B TCL1B Chromosome 16 open reading frame 58 C16orf58 "PREDICTED: similar to cyclophilin-LC (COAS2) (LOC653505), mRNA." - Mediator complex subunit 19 MED19 "Chaperonin containing TCP1, subunit 6A (zeta 1)" CCT6A Cyclin D2 CCND2 KN motif and ankyrin repeat domains 3 KANK3 "Isocitrate dehydrogenase 1 (NADP+), soluble" IDH1 Annexin A1 ANXA1 "Polymerase (DNA directed), epsilon 3 (p17 subunit)" POLE3 "Roundabout, axon guidance receptor, homolog 3 (Drosophila)" ROBO3 "Sprouty homolog 1, antagonist of FGF signaling (Drosophila)" SPRY1 Adenylate kinase 3-like 1 AK3L1 STEAP family member 3 STEAP3 Ankyrin repeat and SOCS box-containing 9 ASB9 Chemokine (C-X-C motif) ligand 16 CXCL16 Regulator of G-protein signaling 4 RGS4 Cingulin-like 1 CGNL1 CDNA clone IMAGE:5261213 - "UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)" UTP11L "Transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)" TLE2 Mitogen-activated protein kinase associated protein 1 MAPKAP1 Prickle homolog 1 (Drosophila) PRICKLE1 Caudal type homeobox 1 CDX1 Eomesodermin homolog (Xenopus laevis) EOMES HtrA serine peptidase 1 HTRA1 Chromosome 1 open reading frame 115 C1orf115 "PREDICTED: membrane-associated ring finger (C3HC4) 3 (MARCH3), mRNA." - "Interleukin 2 receptor, beta" IL2RB Polymerase (RNA) III (DNA directed) polypeptide C (62kD) POLR3C NK3 homeobox 2 NKX3-2 Makorin ring finger protein 1 MKRN1 Peroxisomal biogenesis factor 14 PEX14 "Inositol 1,4,5-triphosphate receptor, type 3" ITPR3 Zinc finger protein 207 ZNF207 Lysophosphatidylcholine acyltransferase 3 LPCAT3 "RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))" RALY Sperm associated antigen 7 SPAG7 "Gap junction protein, gamma 1, 45kDa" GJC1 G patch domain containing 4 GPATCH4 "CCAAT/enhancer binding protein (C/EBP), beta" CEBPB Transmembrane 7 superfamily member 2 TM7SF2 MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish)) MID1IP1 Ubiquitin specific peptidase 3 USP3 Chromosome 10 open reading frame 2 C10orf2 Hyaluronoglucosaminidase 1 HYAL1 Pyruvate carboxylase PC Erythrocyte membrane protein band 4.1-like 2 EPB41L2 Transmembrane protein 150 TMEM150 Vasorin VASN "Histone cluster 1, H1c" HIST1H1C "Sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B" SEMA4B TIMP metallopeptidase inhibitor 4 TIMP4 Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 NFKB1 Resistance to inhibitors of cholinesterase 8 homolog A (C. elegans) RIC8A "Histone cluster 1, H2bk" HIST1H2BK "Protein kinase C, alpha" PRKCA Akirin 2 AKIRIN2 Ribosomal protein L7-like 1 RPL7L1 Wilms tumor 1 interacting protein - "PREDICTED: similar to ribosomal protein L13a, transcript variant 4 (LOC283340), mRNA." - Selenoprotein V SELV "PREDICTED: similar to WW domain binding protein 1 (LOC729843), mRNA." - "Family with sequence similarity 65, member B" FAM65B "Heat shock protein 90kDa alpha (cytosolic), class A member 1" HSP90AA1 RAB3 GTPase activating protein subunit 1 (catalytic) RAB3GAP1 Glutathione S-transferase mu 2 (muscle) GSTM2 Deleted in bladder cancer 1 DBC1 "E74-like factor 3 (ets domain transcription factor, epithelial-specific )" ELF3 Mitochondrial ribosomal protein S17 MRPS17 SH3-domain kinase binding protein 1 SH3KBP1 "Serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)" SPINK2 Selenophosphate synthetase 1 SEPHS1 Integrator complex subunit 10 INTS10 Ornithine aminotransferase (gyrate atrophy) OAT V-raf-1 murine leukemia viral oncogene homolog 1 RAF1 3-hydroxyisobutyrate dehydrogenase HIBADH Host cell factor C1 regulator 1 (XPO1 dependent) HCFC1R1 ADP-ribosylation factor-like 16 ARL16 Transmembrane 7 superfamily member 3 TM7SF3 Kelch domain containing 4 KLHDC4 Regulating synaptic membrane exocytosis 3 RIMS3 Chromosome 9 open reading frame 140 C9orf140 Zinc finger protein 652 ZNF652 Williams Beuren syndrome chromosome region 22 WBSCR22 "Protein phosphatase 1B (formerly 2C), magnesium-dependent, beta isoform" PPM1B Trafficking protein particle complex 1 TRAPPC1 "Isocitrate dehydrogenase 1 (NADP+), soluble" IDH1 Calcium and integrin binding 1 (calmyrin) CIB1 NOP2 nucleolar protein homolog (yeast) NOP2 CDC42 effector protein (Rho GTPase binding) 5 CDC42EP5 Thymosin beta 15B TMSB15B "Protein phosphatase 1, regulatory (inhibitor) subunit 16B" PPP1R16B Taxilin alpha TXLNA Transmembrane protein 99 TMEM99 "Solute carrier family 8 (sodium/calcium exchanger), member 2" SLC8A2 "RAB37, member RAS oncogene family" RAB37 Mitogen-activated protein kinase kinase kinase kinase 1 MAP4K1 Keratin 80 KRT80 Ornithine decarboxylase 1 ODC1 "Zinc finger, CCHC domain containing 12" ZCCHC12 Yip1 interacting factor homolog B (S. cerevisiae) YIF1B CD276 molecule CD276 "PREDICTED: proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 (PSMD12), mRNA." - Zinc finger protein 816A ZNF816A Asparagine synthetase ASNS Growth arrest-specific 7 GAS7 Lysosomal protein transmembrane 4 beta LAPTM4B "Phosphodiesterase 4C, cAMP-specific (phosphodiesterase E1 dunce homolog, Drosophila)" PDE4C "Calponin 3, acidic" CNN3 Developmental pluripotency associated 5 DPPA5 Phosphoserine aminotransferase 1 PSAT1 "Actin, beta" ACTB Minichromosome maintenance complex component 8 MCM8 Mitochondrial ribosomal protein S11 MRPS11 SH2B adaptor protein 3 SH2B3 Calcium/calmodulin-dependent serine protein kinase (MAGUK family) CASK Malectin MLEC CDNA clone IMAGE:5312122 - PAK1 interacting protein 1 PAK1IP1 hypothetical protein LOC255783 (LOC255783) on chromosome 19. - Prostaglandin F2 receptor negative regulator PTGFRN Hypoxia up-regulated 1 HYOU1 "Variable charge, X-linked 2" VCX2 "islet cell autoantigen 1, 69kDa" - Alanyl-tRNA synthetase AARS Acyl-CoA thioesterase 11 ACOT11 Scribbled homolog (Drosophila) SCRIB Keratin associated protein 6-3 KRTAP6-3 Similar to keratin 8 LOC647954 Active BCR-related gene ABR Zinc finger CCCH-type containing 4 ZC3H4 Transcribed locus - "Alkaline phosphatase, placental (Regan isozyme)" ALPP V-crk sarcoma virus CT10 oncogene homolog (avian) CRK "PREDICTED: similar to protein phosphatase 2A 48 kDa regulatory subunit isoform 1; serine/threonine protein phosphatase 2A, 48kDa regulatory subunit; PP2A, subunit B, PR48 isoform; PP2A B subunit PR48; NY-REN-8 antigen (LOC390705), misc RNA." - GTPase activating Rap/RanGAP domain-like 4 GARNL4 "Galactosidase, alpha" GLA Growth differentiation factor 11 GDF11 Delta-like 3 (Drosophila) DLL3 Protein kinase C and casein kinase substrate in neurons 1 PACSIN1 Zinc finger protein 682 ZNF682 DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 DDX24 "Transient receptor potential cation channel, subfamily C, member 4 associated protein" TRPC4AP "FYVE, RhoGEF and PH domain containing 1" FGD1 Interferon stimulated exonuclease gene 20kDa ISG20 "Serine/threonine kinase 36, fused homolog (Drosophila)" STK36 "CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2" CTDSP2 Nucleobindin 1 NUCB1 "Plasminogen activator, urokinase" PLAU "Collagen, type VII, alpha 1" COL7A1 Chromosome 16 open reading frame 68 C16orf68 "Family with sequence similarity 168, member A" FAM168A SHC SH2-domain binding protein 1 SHCBP1 Methyltransferase like 13 METTL13 "Deoxyribonuclease II, lysosomal" DNASE2 Midline 1 (Opitz/BBB syndrome) MID1 Cyclin D1 CCND1 Choline/ethanolamine phosphotransferase 1 CEPT1 "CD248 molecule, endosialin" CD248 "Family with sequence similarity 127, member A" FAM127A "Poly (ADP-ribose) polymerase family, member 3" PARP3 NOP56 ribonucleoprotein homolog (yeast) NOP56 Breast carcinoma amplified sequence 4 BCAS4 Dipeptidase 3 DPEP3 "Variable charge, X-linked 2" VCX2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 DDX51 WW domain binding protein 2 WBP2 Glutathione S-transferase mu 1 GSTM1 "PREDICTED: phosphoglycerate mutase family member 5 (PGAM5), mRNA." - M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) MPHOSPH10 Syntaxin 16 STX16 G protein-coupled receptor 98 GPR98 Apoptosis enhancing nuclease AEN Chromosome 12 open reading frame 41 C12orf41 "Integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)" ITGA3 Intelectin 2 ITLN2 "DnaJ (Hsp40) homolog, subfamily C, member 28" DNAJC28 "Caspase 3, apoptosis-related cysteine peptidase" CASP3 "ATP-binding cassette, sub-family B (MDR/TAP), member 9" ABCB9 Trafficking protein particle complex 9 TRAPPC9 Cell division cycle 20 homolog (S. cerevisiae) CDC20 Exosome component 2 EXOSC2 "PREDICTED: similar to hypothetical LOC389634 (LOC654053), mRNA." - "Solute carrier family 25, member 42" SLC25A42 "PREDICTED: hypothetical LOC126435 (LOC126435), mRNA" - "CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)" CLP1 Calbindin 2 CALB2 Podoplanin PDPN "similar to envelope protein (LOC113386), mRNA." - "Proteasome (prosome, macropain) subunit, alpha type, 4" PSMA4 "Mannosidase, beta A, lysosomal" MANBA "Catenin (cadherin-associated protein), alpha 1, 102kDa" CTNNA1 "Solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19" SLC25A19 Ring finger protein 34 RNF34 Phosphoenolpyruvate carboxykinase 2 (mitochondrial) PCK2 Transmembrane 9 superfamily protein member 4 TM9SF4 Hairy and enhancer of split 4 (Drosophila) HES4 "Regulatory solute carrier protein, family 1, member 1" RSC1A1 Ribosomal protein L39-like RPL39L D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae) DTD1 Syndecan 1 SDC1 Zinc finger protein 621 ZNF621 "GDP-mannose 4,6-dehydratase" GMDS Hairy/enhancer-of-split related with YRPW motif 2 HEY2 Mitochondrial ribosomal protein S12 MRPS12 Nucleolar protein 8 NOL8 Low density lipoprotein receptor-related protein 5 LRP5 "Calcium channel, voltage-dependent, alpha 2/delta subunit 2" CACNA2D2 Epithelial membrane protein 3 EMP3 Adipose differentiation-related protein ADFP "PREDICTED: ATPase, Na+/K+ transporting, beta 3 polypeptide, transcript variant 2 (ATP1B3), mRNA." - Chromosome 11 open reading frame 17 C11orf17 "Solute carrier family 20 (phosphate transporter), member 1" SLC20A1 "Lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)" LSS "BTG family, member 2" BTG2 JTV1 gene JTV1 SH3-domain GRB2-like endophilin B2 SH3GLB2 "Cation channel, sperm associated 2" CATSPER2 DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) DIMT1L Myosin VC MYO5C "Similar to meteorin, glial cell differentiation regulator-like" LOC653506 "Zinc finger, NFX1-type containing 1" ZNFX1 CD19 molecule CD19 "Signal recognition particle receptor, B subunit" SRPRB Rho GDP dissociation inhibitor (GDI) beta ARHGDIB SAM and SH3 domain containing 1 SASH1 "Cysteine-rich, angiogenic inducer, 61" CYR61 Ribosomal protein L9 RPL9 Chromosome 2 open reading frame 34 C2orf34 Ring finger protein 1 RING1 Neurotensin NTS "PREDICTED: hypothetical protein LOC731835 (LOC731835), mRNA." - "DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast)" DMC1 DTW domain containing 2 DTWD2 Tetratricopeptide repeat domain 15 TTC15 Chemokine (C-C motif) receptor 7 CCR7 Peptidyl-tRNA hydrolase 2 PTRH2 Arylsulfatase E (chondrodysplasia punctata 1) ARSE Frizzled homolog 2 (Drosophila) FZD2 "Caveolin 1, caveolae protein, 22kDa" CAV1 "Phosphatidylinositol-specific phospholipase C, X domain containing 1" PLCXD1 Arginine vasopressin-induced 1 AVPI1 "PREDICTED: hypothetical protein LOC642477, transcript variant 2 (LOC642477), mRNA." - SET and MYND domain containing 3 SMYD3 MAP7 domain containing 1 MAP7D1 "Methionine adenosyltransferase II, alpha" MAT2A Peptidase D PEPD Oral cancer overexpressed 1 ORAOV1 "Neuroguidin, EIF4E binding protein" NGDN Histidine triad nucleotide binding protein 2 HINT2 Prostate cancer susceptibility candidate PRAC "General transcription factor IIIC, polypeptide 6, alpha 35kDa" GTF3C6 Fibroblast growth factor 19 FGF19 Myoferlin MYOF Chromosome 21 open reading frame 59 C21orf59 "Phenylalanyl-tRNA synthetase 2, mitochondrial" FARS2 MAP kinase interacting serine/threonine kinase 2 MKNK2 "PREDICTED: similar to Keratin, type I cytoskeletal 18 (Cytokeratin-18) (CK-18) (Keratin-18) (K18) (LOC646723), mRNA." - Ectonucleotide pyrophosphatase/phosphodiesterase 2 ENPP2 Chromosome X open reading frame 40A CXorf40A Smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) SMU1 "Transcription factor 7-like 1 (T-cell specific, HMG-box)" TCF7L1 Cyclin-dependent kinase 10 CDK10 "DnaJ (Hsp40) homolog, subfamily C, member 7" DNAJC7 "Sortilin-related receptor, L(DLR class) A repeats-containing" SORL1 G protein-coupled receptor 56 GPR56 "Catenin (cadherin-associated protein), beta 1, 88kDa" CTNNB1 "PREDICTED: hypothetical LOC388755 (LOC388755), mRNA." - Integrator complex subunit 12 INTS12 Carbonic anhydrase II CA2 Chromosome 14 open reading frame 159 C14orf159 DNL-type zinc finger DNLZ "N-acetyltransferase 5 (GCN5-related, putative)" NAT5 Fibroblast growth factor receptor 4 FGFR4 Pyrophosphatase (inorganic) 2 PPA2 Ribosomal protein L7-like 1 RPL7L1 Nuclear receptor co-repressor 2 NCOR2 "SID1 transmembrane family, member 2" SIDT2 "Solute carrier family 25 (mitochondrial carrier, brain), member 14" SLC25A14 Transmembrane channel-like 6 TMC6 "Growth arrest and DNA-damage-inducible, alpha" GADD45A Chromosome 20 open reading frame 177 C20orf177 "Coronin, actin binding protein, 1B" CORO1B AHNAK nucleoprotein AHNAK "Inhibitor of DNA binding 3, dominant negative helix-loop-helix protein" ID3 Small nuclear ribonucleoprotein polypeptide N SNRPN Tumor protein p63 regulated 1-like TPRG1L Voltage-dependent anion channel 3 VDAC3 Nuclear factor (erythroid-derived 2)-like 3 NFE2L3 Death effector domain containing 2 DEDD2 Zinc finger protein 286A ZNF286A "CDNA FLJ31750 fis, clone NT2RI2007406" - Polyribonucleotide nucleotidyltransferase 1 PNPT1 NOP2 nucleolar protein homolog (yeast) NOP2 Amyloid beta (A4) precursor protein APP Trafficking protein particle complex 2-like TRAPPC2L Neurotrophin 3 NTF3 Proline/serine-rich coiled-coil 1 PSRC1 Translocase of inner mitochondrial membrane 22 homolog (yeast) TIMM22 "Proteasome (prosome, macropain) subunit, beta type, 10" PSMB10 Tetraspanin 9 TSPAN9 GATA binding protein 2 GATA2 Protein arginine methyltransferase 5 PRMT5 Dynactin 2 (p50) DCTN2 Immediate early response 3 IER3 "Zinc finger, matrin type 3" ZMAT3 "Arrestin, beta 1" ARRB1 Keratin associated protein 21-2 KRTAP21-2 "Cirrhosis, autosomal recessive 1A (cirhin)" CIRH1A F11 receptor F11R "NACC family member 2, BEN and BTB (POZ) domain containing" NACC2 Cathepsin L1 CTSL1 Actin filament associated protein 1 AFAP1 "Family with sequence similarity 116, member B" FAM116B "PREDICTED: hypothetical protein LOC648852 (LOC648852), mRNA." - CUB and Sushi multiple domains 1 CSMD1 "Variable charge, X-linked 2" VCX2 "Glutamate decarboxylase 1 (brain, 67kDa)" GAD1 Dehydrogenase/reductase (SDR family) member 7 DHRS7 "Tumor necrosis factor receptor superfamily, member 12A" TNFRSF12A Keratin 8 KRT8 "Glutamate receptor, metabotropic 4" GRM4 "succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1 (SDHALP1) on chromosome 3." - "Protein phosphatase 1, regulatory (inhibitor) subunit 11" PPP1R11 Homer homolog 2 (Drosophila) HOMER2 Rab9 effector protein with kelch motifs RABEPK Fc fragment of IgG binding protein FCGBP Carboxymethylenebutenolidase homolog (Pseudomonas) CMBL Acyl-CoA synthetase short-chain family member 2 ACSS2 OAF homolog (Drosophila) OAF "Alpha 1,4-galactosyltransferase" A4GALT CAMP responsive element binding protein 1 CREB1 "Phospholipase A2, group III" PLA2G3 Chromosome 8 open reading frame 33 C8orf33 "Mannosidase, alpha, class 1C, member 1" MAN1C1 Growth differentiation factor 15 GDF15 Frizzled homolog 7 (Drosophila) FZD7 Bone morphogenetic protein 4 BMP4 DEP domain containing 6 DEPDC6 Interleukin 10 IL10 "Leucine zipper, down-regulated in cancer 1" LDOC1 Leptin receptor LEPR "Dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)" DYSF E4F transcription factor 1 E4F1 Ankyrin repeat domain 9 ANKRD9 Zinc fingers and homeoboxes 2 ZHX2 Cystathionase (cystathionine gamma-lyase) CTH Tumor suppressing subtransferable candidate 4 TSSC4 "Sphingomyelin phosphodiesterase, acid-like 3B" SMPDL3B "Notch homolog 1, translocation-associated (Drosophila)" NOTCH1 "LPS-responsive vesicle trafficking, beach and anchor containing" LRBA NDRG family member 2 NDRG2 Polynucleotide kinase 3'-phosphatase PNKP Transmembrane protein 41B TMEM41B Methyltransferase like 7A METTL7A Chromosome 7 open reading frame 27 C7orf27 Glycyl-tRNA synthetase GARS Suppressor of cytokine signaling 2 SOCS2 "Phosphatidylinositol transfer protein, cytoplasmic 1" PITPNC1 Cysteine-rich PDZ-binding protein CRIPT Dedicator of cytokinesis 6 DOCK6 G protein-coupled receptor 56 GPR56 De-etiolated homolog 1 (Arabidopsis) DET1 "Phenylalanyl-tRNA synthetase, beta subunit" FARSB Chromosome 11 open reading frame 59 C11orf59 RNA terminal phosphate cyclase-like 1 RCL1 "Protein phosphatase 1, regulatory (inhibitor) subunit 1B" PPP1R1B Histidyl-tRNA synthetase HARS Monocyte to macrophage differentiation-associated MMD Cathepsin L2 CTSL2 Kinesin family member 1B KIF1B "Family with sequence similarity 53, member C" FAM53C Chromosome 7 open reading frame 47 C7orf47 Cysteine-serine-rich nuclear protein 1 CSRNP1 "Myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11" MLLT11 Serrate RNA effector molecule homolog (Arabidopsis) SRRT Cytoplasmic linker associated protein 1 CLASP1 "Leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1" LILRB1 "Sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1" SPOCK1 THO complex 5 THOC5 "Polymerase (RNA) I polypeptide D, 16kDa" POLR1D Transgelin TAGLN "Capping protein (actin filament) muscle Z-line, beta" CAPZB "Activin A receptor, type IB" ACVR1B "Ribosomal protein S6 kinase, 90kDa, polypeptide 2" RPS6KA2 Tripartite motif-containing 8 TRIM8 "Cat eye syndrome chromosome region, candidate 1" CECR1 "Small nuclear RNA activating complex, polypeptide 4, 190kDa" SNAPC4 Mitogen-activated protein kinase 3 MAPK3 zinc finger protein 486 - Talin 2 TLN2 "Diacylglycerol lipase, beta" DAGLB Tubulin folding cofactor D TBCD Transmembrane and ubiquitin-like domain containing 2 TMUB2 "Lon peptidase 1, mitochondrial" LONP1 Cyclin D3 CCND3 EPH receptor A1 EPHA1 Paired-like homeodomain 1 PITX1 Nerve growth factor receptor (TNFRSF16) associated protein 1 NGFRAP1 Chromosome 5 open reading frame 28 C5orf28 "Catenin, beta interacting protein 1" CTNNBIP1 Chemokine (C-C motif) receptor 6 CCR6 "Cholinergic receptor, nicotinic, beta 1 (muscle)" CHRNB1 "tubulin, alpha pseudogene" - Acetyl-Coenzyme A carboxylase alpha ACACA Serine hydroxymethyltransferase 1 (soluble) SHMT1 "Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3" PLOD3 Williams Beuren syndrome chromosome region 19 pseudogene (LOC389517) on chromosome 7. - PQ loop repeat containing 3 PQLC3 Immediate early response 5 IER5 Brain and reproductive organ-expressed (TNFRSF1A modulator) BRE "Variable charge, X-linked 3B" VCX3B Exostoses (multiple)-like 3 EXTL3 "hypothetical protein LOC649598 (FLJ46309), mRNA." - Acetyl-Coenzyme A carboxylase alpha ACACA Ring finger and WD repeat domain 3 RFWD3 Nuclear factor (erythroid-derived 2)-like 1 NFE2L1 "Zinc finger, RAN-binding domain containing 2" ZRANB2 Carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8 CHST8 "Variable charge, X-linked" VCX CAP-GLY domain containing linker protein 2 CLIP2 "PREDICTED: G-protein signalling modulator 1 (AGS3-like, C. elegans) (GPSM1), mRNA." - Surfeit 6 SURF6 Histone deacetylase 1 HDAC1 Uromodulin-like 1 UMODL1 "Neuroblastoma breakpoint family, member 10" NBPF10 Chromosome 11 open reading frame 71 C11orf71 Chromosome X open reading frame 40B CXorf40B Thymosin beta 15a TMSB15A CD68 molecule CD68 "Solute carrier family 6 (neurotransmitter transporter, glycine), member 9" SLC6A9 "REX4, RNA exonuclease 4 homolog (S. cerevisiae)" REXO4 Chromosome 7 open reading frame 26 C7orf26 Coiled-coil domain containing 21 CCDC21 "Protease, serine, 8" PRSS8 "PREDICTED: similar to Keratin, type I cytoskeletal 14 (Cytokeratin-14) (CK-14) (Keratin-14) (K14) (LOC400578), mRNA." - Tetratricopeptide repeat domain 39B TTC39B CD44 molecule (Indian blood group) CD44 "RAS-like, family 11, member B" RASL11B GLI pathogenesis-related 2 GLIPR2 Carbonyl reductase 3 CBR3 Interferon regulatory factor 7 IRF7 "Solute carrier family 39 (metal ion transporter), member 11" SLC39A11 Interleukin 18 (interferon-gamma-inducing factor) IL18 "Mal, T-cell differentiation protein 2" MAL2 TAR (HIV-1) RNA binding protein 2 TARBP2 "Cytochrome P450, family 2, subfamily S, polypeptide 1" CYP2S1 "NLR family, pyrin domain containing 8" NLRP8 Peroxisomal biogenesis factor 11 beta PEX11B Chromodomain helicase DNA binding protein 8 CHD8 "Adaptor-related protein complex 3, delta 1 subunit" AP3D1 "Cyclin-dependent kinase inhibitor 1A (p21, Cip1)" CDKN1A Integrin alpha FG-GAP repeat containing 1 ITFG1 "Lectin, galactoside-binding, soluble, 7B" LGALS7B Signal transducer and activator of transcription 5A STAT5A WD repeat domain 75 WDR75 Fibulin 1 FBLN1 "Protein tyrosine phosphatase, receptor type, A" PTPRA Rho GTPase activating protein 4 ARHGAP4 MAP/microtubule affinity-regulating kinase 2 MARK2 "Zinc finger protein, multitype 1" ZFPM1 IMP (inosine monophosphate) dehydrogenase 1 IMPDH1 Myosin phosphatase Rho interacting protein MPRIP Chromosome 10 open reading frame 58 C10orf58 Chromosome 17 open reading frame 58 C17orf58 Transcribed locus - SplA/ryanodine receptor domain and SOCS box containing 2 SPSB2 Coagulation factor II (thrombin) receptor F2R Talin 1 TLN1 Keratin 17 KRT17 Fibroblast growth factor receptor-like 1 FGFRL1 Block of proliferation 1 BOP1 Fibulin 1 FBLN1 Adrenomedullin ADM "Transforming, acidic coiled-coil containing protein 2" TACC2 Mediator complex subunit 10 MED10 "Protein tyrosine phosphatase, receptor type, K" PTPRK Four jointed box 1 (Drosophila) FJX1 LanC lantibiotic synthetase component C-like 1 (bacterial) LANCL1 28S ribosomal RNA (LOC100008589). - Carnitine palmitoyltransferase 1A (liver) CPT1A "Solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1" SLC9A3R1 Fibroblast growth factor receptor 4 FGFR4 "Protein inhibitor of activated STAT, 4" PIAS4 Small nuclear ribonucleoprotein polypeptide N SNRPN OCIA domain containing 1 OCIAD1 Neuronal PAS domain protein 1 NPAS1 ankyrin repeat domain 30B - Pre-B-cell leukemia homeobox 1 PBX1 Sequestosome 1 SQSTM1 Like-glycosyltransferase LARGE "Transcription factor A, mitochondrial" TFAM CAP-GLY domain containing linker protein 2 CLIP2 Pseudouridylate synthase 1 PUS1 Notch homolog 3 (Drosophila) NOTCH3 T-box 3 TBX3 Ankyrin repeat domain 35 ANKRD35 Heat shock 70kDa protein 1A HSPA1A "Low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" LRP8 "Smith-Magenis syndrome chromosome region, candidate 7-like" SMCR7L Mitogen-activated protein kinase kinase kinase 7 interacting protein 1 MAP3K7IP1 "PREDICTED: similar to Nuclear envelope pore membrane protein POM 121 (Pore membrane protein of 121 kDa) (P145) (LOC730316), mRNA." - Dymeclin DYM Nasal embryonic LHRH factor NELF Acetyl-Coenzyme A acetyltransferase 2 ACAT2 "NUAK family, SNF1-like kinase, 2" NUAK2 Pre-B-cell leukemia homeobox 3 PBX3 Chemokine (C-X-C motif) ligand 14 CXCL14 Rho guanine nucleotide exchange factor (GEF) 10 ARHGEF10 Prohibitin PHB "Tumor protein, translationally-controlled 1" TPT1 Methylphosphate capping enzyme MEPCE Receptor accessory protein 6 REEP6 Upstream transcription factor 1 USF1 Cytochrome c oxidase subunit VIIc COX7C "Bromodomain and PHD finger containing, 3" BRPF3 F-box and leucine-rich repeat protein 20 FBXL20 Forkhead box O4 FOXO4 AarF domain containing kinase 1 ADCK1 Tetratricopeptide repeat domain 4 TTC4 "Solute carrier family 23 (nucleobase transporters), member 2" SLC23A2 E74-like factor 4 (ets domain transcription factor) ELF4 "Solute carrier family 16, member 10 (aromatic amino acid transporter)" SLC16A10 Dual specificity phosphatase 14 DUSP14 Tumor suppressing subtransferable candidate 1 TSSC1 "Regulatory solute carrier protein, family 1, member 1" RSC1A1 KIAA0319-like KIAA0319L "Ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)" UBE2J1 Chromosome 6 open reading frame 106 C6orf106 Exosome component 10 EXOSC10 Chromosome 7 open reading frame 50 C7orf50 Ribosomal protein L29 RPL29 Microsomal glutathione S-transferase 3 MGST3 "Neuroblastoma breakpoint family, member 10" NBPF10 "Solute carrier family 29 (nucleoside transporters), member 2" SLC29A2 "proteasome (prosome, macropain) inhibitor subunit 1 (PI31)" - Chromosome 19 open reading frame 62 C19orf62 Peroxisomal proliferator-activated receptor A interacting complex 285 PRIC285 "PREDICTED: solute carrier family 45, member 4, transcript variant 2 (SLC45A4), mRNA." - "PREDICTED: similar to Zinc finger protein 418 (LOC400721), mRNA." - "Integrin, alpha 9" ITGA9 Baculoviral IAP repeat-containing 5 BIRC5 Phosphoglucomutase 1 PGM1 Methyltransferase like 1 METTL1 Transmembrane protein 9 TMEM9 "IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)" IMP4 Acetoacetyl-CoA synthetase AACS Claudin 10 CLDN10 Cysteine-rich secretory protein LCCL domain containing 2 CRISPLD2 Bromodomain containing 9 BRD9 Protein phosphatase 1H (PP2C domain containing) PPM1H "Pleckstrin homology domain containing, family G (with RhoGef domain) member 3" PLEKHG3 Transmembrane protein 185A TMEM185A Peter pan homolog (Drosophila) PPAN Coiled-coil-helix-coiled-coil-helix domain containing 6 CHCHD6 CUE domain containing 1 CUEDC1 Sulfatase modifying factor 2 SUMF2 Von Willebrand factor C and EGF domains VWCE Enah/Vasp-like EVL "Nuclear factor (erythroid-derived 2), 45kDa" NFE2 "ArfGAP with GTPase domain, ankyrin repeat and PH domain 1" AGAP1 Autoimmune regulator AIRE Chromosome 17 open reading frame 58 C17orf58 "MAS-related GPR, member F" MRGPRF C-Maf-inducing protein CMIP Mannose-6-phosphate receptor binding protein 1 M6PRBP1 Fatty acid desaturase 1 FADS1 Hairy and enhancer of split 2 (Drosophila) HES2 Microtubule-actin crosslinking factor 1 MACF1 "Variable charge, X-linked 3A" VCX3A SH3-binding domain kinase 1 SBK1 "Growth arrest and DNA-damage-inducible, alpha" GADD45A "ST6 beta-galactosamide alpha-2,6-sialyltranferase 1" ST6GAL1 "ATPase, Ca++ transporting, plasma membrane 4" ATP2B4 COX17 cytochrome c oxidase assembly homolog (S. cerevisiae) COX17 Mediator complex subunit 20 MED20 Midline 1 (Opitz/BBB syndrome) MID1 Thymine-DNA glycosylase TDG Fidgetin-like 2 FIGNL2 Chromosome 9 open reading frame 80 C9orf80 Staphylococcal nuclease and tudor domain containing 1 SND1 CD68 molecule CD68 "Solute carrier family 22, member 23" SLC22A23 Glucosamine-6-phosphate deaminase 1 GNPDA1 Fat mass and obesity associated FTO SRY (sex determining region Y)-box 15 SOX15 "Filamin B, beta (actin binding protein 278)" FLNB Chromosome 16 open reading frame 93 C16orf93 Stromal cell derived factor 4 SDF4 NMD3 homolog (S. cerevisiae) NMD3 "Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B" SEMA6B Spastic paraplegia 7 (pure and complicated autosomal recessive) SPG7 Thymosin beta 15B TMSB15B "Collagen, type XVII, alpha 1" COL17A1 Thy-1 cell surface antigen THY1 "PREDICTED: similar to Keratin, type I cytoskeletal 16 (Cytokeratin-16) (CK-16) (Keratin-16) (K16) (MGC102966), misc RNA." - "Sodium channel, nonvoltage-gated 1 alpha" SCNN1A "Solute carrier family 16, member 12 (monocarboxylic acid transporter 12)" SLC16A12 Nucleoporin 210kDa NUP210 "Casein kinase 1, delta" CSNK1D Ubiquitin specific peptidase 44 USP44 "Solute carrier family 2 (facilitated glucose transporter), member 1" SLC2A1 Glycoprotein M6B GPM6B "Congenital dyserythropoietic anemia, type I" CDAN1 Transmembrane emp24 domain trafficking protein 2 TMED2 Zinc finger protein 430 ZNF430 Chemokine-like factor CKLF Chromosome 11 open reading frame 82 C11orf82 Leucine rich repeat containing 33 LRRC33 SPRY domain containing 5 SPRYD5 "NOL1/NOP2/Sun domain family, member 7" NSUN7 "H2A histone family, member Y" H2AFY Ring finger protein 150 RNF150 "Solute carrier family 2 (facilitated glucose transporter), member 3" SLC2A3 TRNA splicing endonuclease 34 homolog (S. cerevisiae) TSEN34 NEDD4 binding protein 2 N4BP2 chromosome 14 open reading frame 80 - Cingulin CGN "olfactory receptor, family 7, subfamily E, member 156 pseudogene" - Cellular retinoic acid binding protein 2 CRABP2