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Population Genomics of Sub-Saharan Drosophila melanogaster: African Diversity and Non-African Admixture

Figure 6

Relative nucleotide diversity, scaled by πRG, was calculated for each population sample.

This method allowed the comparison of diversity between populations with missing data in different genomic regions, and allowed the inclusion of secondary core genomes. Values were corrected for the modest predicted effects of sequencing depth (see Materials and Methods), and were based on non-centromeric, non-telomeric chromosomal regions, and equal weighting of chromosome arms.

Figure 6