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Identification of Genomic Regions Associated with Phenotypic Variation between Dog Breeds using Selection Mapping

Figure 2

Identification of variants with large differences in allele frequencies between breeds that are associated with phenotypic variation.

The top panel shows the variation in pairwise fixation index (see text for definition) at SNPs across the genome on the CanineHD array. The bottom panel shows GWAS for three traits (curly tail, drop ear, and sociality) with signals that correspond to SNPs with high population differentiation. P-values from breed permutations are also shown.

Figure 2

doi: https://doi.org/10.1371/journal.pgen.1002316.g002