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U87MG Decoded: The Genomic Sequence of a Cytogenetically Aberrant Human Cancer Cell Line

Figure 1

SNP chip and base sequence coverage compared.

Circos [36] was used to plot base sequence coverage from ABI sequencing as a histogram (the outermost plot, green and black) alongside dot plots of the LogR-ratio (middle plot, blue) and B-allele frequency (innermost plot, red) from the Illumina Human 1M Duo BeadChip microarray. LogR-ratio represents copy number (CN) and B-allele frequency represents loss of heterozygosity (LOH).

Figure 1

doi: https://doi.org/10.1371/journal.pgen.1000832.g001