A Strand-Specific RNA–Seq Analysis of the Transcriptome of the Typhoid Bacillus Salmonella Typhi
Figure 6
Previously identified and novel putative ncRNA.
The AM for each intergenic feature (mean and range) derived over three biological replicates. (A) Previously identified ncRNA and (B) ncRNA elements identified by this study. (C) Putative ncRNA elements in SPI-1. Identification of 4 intergenic regions of sequenced transcript, 3 predicted to be cis-acting 5′ elements (upstream of sprA (RUF_220c, 1) sprB (RUF_219c, 2) iagA (RUF_221, 4), and 1 possible 3′ UTR (downstream of sprB, RUF_218c, 3), within the cell invasion locus, SPI-1. Transcript represented by plot (predicted ncRNA represented by red box, log scale, forward strand (blue) and reverse strand (red), window size 200 bp).