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Open Access
Peer-reviewed
Research Article
Distinctive Expansion of Potential Virulence Genes in the Genome of the Oomycete Fish Pathogen Saprolegnia parasitica
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Rays H. Y. Jiang ,
Contributed equally to this work with: Rays H. Y. Jiang, Irene de Bruijn, Brian J. Haas
Affiliation Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America
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Irene de Bruijn ,
Contributed equally to this work with: Rays H. Y. Jiang, Irene de Bruijn, Brian J. Haas
Current address: Laboratory of Phytopathology, Wageningen University, Wageningen, The Netherlands.
Affiliation Aberdeen Oomycete Laboratory, School of Medical Sciences, University of Aberdeen, Aberdeen, United Kingdom
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Brian J. Haas ,
Contributed equally to this work with: Rays H. Y. Jiang, Irene de Bruijn, Brian J. Haas
Affiliation Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America
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Rodrigo Belmonte,
Affiliations Aberdeen Oomycete Laboratory, School of Medical Sciences, University of Aberdeen, Aberdeen, United Kingdom, Scottish Fish Immunology Research Centre, School of Biological Sciences, University of Aberdeen, Aberdeen, United Kingdom
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Lars Löbach,
Affiliation Aberdeen Oomycete Laboratory, School of Medical Sciences, University of Aberdeen, Aberdeen, United Kingdom
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James Christie,
Affiliations Aberdeen Oomycete Laboratory, School of Medical Sciences, University of Aberdeen, Aberdeen, United Kingdom, Scottish Fish Immunology Research Centre, School of Biological Sciences, University of Aberdeen, Aberdeen, United Kingdom
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Guido van den Ackerveken,
Affiliation Plant-Microbe Interactions, Department of Biology, Utrecht University, Utrecht, The Netherlands
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Arnaud Bottin,
Affiliation Université de Toulouse; UPS; Laboratoire de Recherche en Sciences Végétales, Castanet-Tolosan, France and CNRS, Laboratoire de Recherche en Sciences Végétales, Auzeville, Castanet-Tolosan, France
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Vincent Bulone,
Affiliation Division of Glycoscience, School of Biotechnology, Royal Institute of Technology (KTH), AlbaNova University Centre, Stockholm, Sweden
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Sara M. Díaz-Moreno,
Affiliation Division of Glycoscience, School of Biotechnology, Royal Institute of Technology (KTH), AlbaNova University Centre, Stockholm, Sweden
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Bernard Dumas,
Affiliation Université de Toulouse; UPS; Laboratoire de Recherche en Sciences Végétales, Castanet-Tolosan, France and CNRS, Laboratoire de Recherche en Sciences Végétales, Auzeville, Castanet-Tolosan, France
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Lin Fan,
Affiliation Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America
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Elodie Gaulin,
Affiliation Université de Toulouse; UPS; Laboratoire de Recherche en Sciences Végétales, Castanet-Tolosan, France and CNRS, Laboratoire de Recherche en Sciences Végétales, Auzeville, Castanet-Tolosan, France
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Francine Govers,
Affiliations Laboratory of Phytopathology, Wageningen University, Wageningen, The Netherlands, Centre for BioSystems Genomics, Wageningen, The Netherlands
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Laura J. Grenville-Briggs,
Affiliations Aberdeen Oomycete Laboratory, School of Medical Sciences, University of Aberdeen, Aberdeen, United Kingdom, Division of Glycoscience, School of Biotechnology, Royal Institute of Technology (KTH), AlbaNova University Centre, Stockholm, Sweden
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Neil R. Horner,
Affiliation Aberdeen Oomycete Laboratory, School of Medical Sciences, University of Aberdeen, Aberdeen, United Kingdom
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Joshua Z. Levin,
Affiliation Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America
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Marco Mammella,
Affiliation Dipartimento di Gestione dei Sistemi Agrari e Forestali, Università degli Studi Mediterranea, Reggio Calabria, Italy
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Harold J. G. Meijer,
Affiliation Laboratory of Phytopathology, Wageningen University, Wageningen, The Netherlands
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Paul Morris,
Affiliation Department of Biological Sciences, Bowling Green State University, Bowling Green, Ohio, United States of America
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Chad Nusbaum,
Affiliation Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America
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Stan Oome,
Affiliation Plant-Microbe Interactions, Department of Biology, Utrecht University, Utrecht, The Netherlands
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Andrew J. Phillips,
Affiliation Aberdeen Oomycete Laboratory, School of Medical Sciences, University of Aberdeen, Aberdeen, United Kingdom
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David van Rooyen,
Affiliation Aberdeen Oomycete Laboratory, School of Medical Sciences, University of Aberdeen, Aberdeen, United Kingdom
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Elzbieta Rzeszutek,
Affiliation Division of Glycoscience, School of Biotechnology, Royal Institute of Technology (KTH), AlbaNova University Centre, Stockholm, Sweden
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Marcia Saraiva,
Affiliation Aberdeen Oomycete Laboratory, School of Medical Sciences, University of Aberdeen, Aberdeen, United Kingdom
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Chris J. Secombes,
Affiliation Scottish Fish Immunology Research Centre, School of Biological Sciences, University of Aberdeen, Aberdeen, United Kingdom
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Michael F. Seidl,
Affiliations Centre for BioSystems Genomics, Wageningen, The Netherlands, Theoretical Biology and Bioinformatics, Department of Biology, Utrecht University, Utrecht, The Netherlands
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Berend Snel,
Affiliations Centre for BioSystems Genomics, Wageningen, The Netherlands, Theoretical Biology and Bioinformatics, Department of Biology, Utrecht University, Utrecht, The Netherlands
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Joost H. M. Stassen,
Affiliation Plant-Microbe Interactions, Department of Biology, Utrecht University, Utrecht, The Netherlands
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Sean Sykes,
Affiliation Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America
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Sucheta Tripathy,
Affiliation Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University, Blacksburg, Virginia, United States of America
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Herbert van den Berg,
Affiliation Aberdeen Oomycete Laboratory, School of Medical Sciences, University of Aberdeen, Aberdeen, United Kingdom
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Julio C. Vega-Arreguin,
Affiliation ENES Unidad León, Universidad Nacional Autónoma de México, León, Mexico
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Stephan Wawra,
Affiliation Aberdeen Oomycete Laboratory, School of Medical Sciences, University of Aberdeen, Aberdeen, United Kingdom
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Sarah K. Young,
Affiliation Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America
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Qiandong Zeng,
Affiliation Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America
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Javier Dieguez-Uribeondo,
Affiliation Departamento de Micología, Real Jardín Botánico CSIC, Madrid, Spain
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Carsten Russ ,
¶* These authors also contributed equally to this work.
Affiliation Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America
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Brett M. Tyler ,
Current address: Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, United States of America.
¶* These authors also contributed equally to this work.
Affiliation Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University, Blacksburg, Virginia, United States of America
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Pieter van West
* E-mail: p.vanwest@abdn.ac.uk
¶* These authors also contributed equally to this work.
Affiliation Aberdeen Oomycete Laboratory, School of Medical Sciences, University of Aberdeen, Aberdeen, United Kingdom
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Distinctive Expansion of Potential Virulence Genes in the Genome of the Oomycete Fish Pathogen Saprolegnia parasitica
- Rays H. Y. Jiang,
- Irene de Bruijn,
- Brian J. Haas,
- Rodrigo Belmonte,
- Lars Löbach,
- James Christie,
- Guido van den Ackerveken,
- Arnaud Bottin,
- Vincent Bulone,
- Sara M. Díaz-Moreno
- Published: June 13, 2013
- https://doi.org/10.1371/journal.pgen.1003272