#################### EXPLANATIONS ########################################## The data below compare the reported motifs and binding sites of Harbison et al. with the results that PhyloGibbs reports when run on the $5$ species multiple alignments of all upstream regions with sites annotated for a given TF in Harbison et al. There are two separate sets of results. The first results were obtained when PhyloGibbs was run with motif width 15, and the second set when PhyloGibbs was run with the same motif width as the width reported in Harbison et al. For each of the 45 TFs, the results are in order: 1) Line with TF name and the total number of sites and intergenic regions annotated with sites: format: TF name_Snum1_Gnum2 where num1 is the total number of annotated sites in Harbison et al. and num2 is the number of intergenic regions with sites. 2) For each of 3 motifs PhyloGibbs reports the match probabilities P(n,m) between the alignment of sites in PhyloGibbs' reference configuration and the alignment of sites implied by the motif in Harbison et al. (3 lines) Example: MOTIF 1 ADR1 0.95 -9 - AFT2 0.93 -11 - RCS1 0.46 -11 - SPT23 0.89 -11 + The alignment of sites in MOTIF 1 matches the alignment of sites annotated for ADR1 with probability 0.95. This match is obtained when the PhyloGibbs sites are shifted 9 to the left with respect to those annotated in Harbison et al. and reverse-complemented. Similarly, the Phylogibbs alignment matches that of AFT2 with probability 0.93 when shifted 11 to the left and reverse complemented, etcetera. Note that this PhyloGibbs motif has significant matches with 4 different WMs (ADR1, AFT2, RCS1, SPT23) reported in Harbison et al. 3) The same statistics for the 3 motifs that PhyloGibbs reports in tracking (i.e. all sites are weighed by their posterior probabilities). (3 lines) 4) For each motif the overlap of the sites with annotated sites in Harbison et al. (3 lines) Example: MOTIF 1 a:12 t:9.25 YAP7 a:0.75 t:0.78 CAD1 a:0.75 t:0.78 YAP1 a:0.33 t:0.38 GCN4 a:0.08 t:0 YAP6 a:0.08 t:0.1 This line indicates that MOTIF 1 in PhyloGibbs has 12 sites in the reference configuration C* and on average 9.25 sites during tracking. 75% of the sites for this motif in the reference configuration (anneal) overlap a site that is annotated as YAP7 in Harbison et al. During tracking on average 78% of the 9.25 sites in this motif overlap a site annotated as YAP7. Exactly equal numbers of sites overlap sites annotated for CAD1 in Harbison et al. 33% of the 12 sites in the reference configuration and on average 38% of the sites during tracking overlap sites annotated as GCN4 in Harbison et al. Finally, 8% of the sites in the reference configuration, and on average 10% of the sites during tracking overlap sites annotated for YAP6. 5)Information scores of the WMs reported by PhyloGibbs (3 lines) Example: MOTIF 1 15 a:15.87 1.06 t:16.15 1.08 ref:10 12.72 1.27 Motif 1 has length 15, The alignment of sites for this motif in the reference confifuration C* has a total information score of 15.87 bits per site, which equals 1.06 bits per base per site. The weighted alignment of sites during tracking has 16.15 bits of information per site, which corresponds to 1.08 bits per base per site. For comparison we also show the information score for the WM that is reported in Harbison et al. for the TF in question. In this example this WM has length 10, a total of 12.72 bits of information per site, equalling 1.27 bits per base per site. 6) A list of all the ORFs with sites annotated for this TF in Harbison et al. (1 line) 7) For each motif that PhyloGibbs reports a list with the number of sites in reference configuration C* that each of the ORFs has, and the total number of sites weighted with their posterior probabilities (6 lines) Example: MOTIF 3 total 4 YKR071C 2 YKL040C 1 YMR038C 1 MOTIF 3 total 2.24 YKL103C 0.75 YKR071C 0.44 YGR234W 0.38 YKL040C 0.35 YJL101C 0.32 MOTIF 3 has 4 sits in total of which 2 fall inside the upstream region of YKR071C, one upstream of YKL040C, and one upstream of YMR038C. During tracking there are 2.24 sites on average with 0.75 sites in YKL103C, 0.44 sites in YKR071C, 0.38 sites in YGR234W, 0.35 sites in YKL040C, and 0.32 sites in YJL101C. ############### END EXPLANATIONS ######################################## ############## COMPARISON WITH MOTIF WIDTH 15 ###################### ACE2_S12_G7 MOTIF 1 ACE2 0 -11 + MOTIF 2 ACE2 0 -11 - RFX1 0.9 -10 - MOTIF 3 ACE2 0 -1 - MOTIF 2 MOTIF 1 MOTIF 3 MOTIF 1 a:9 t:0 SWI4 a:0.11 t:0 SWI6 a:0.11 t:0 MOTIF 2 a:10 t:3.7 SWI5 a:0.1 t:0.24 TEC1 a:0.1 t:0 DIG1 a:0.1 t:0 SWI6 a:0.1 t:0.07 STE12 a:0.1 t:0 MOTIF 3 a:7 t:0 RFX1 a:0.14 t:0 MOTIF 1 15 a:12.02 0.8 t:0 0 ref:7 10.78 1.54 MOTIF 2 15 a:13.09 0.87 t:10.89 0.73 ref:7 10.78 1.54 MOTIF 3 15 a:12.78 0.85 t:0 0 ref:7 10.78 1.54 YLR286C YGR041W YER124C YDL127W YNL328C YNL079C YBR157C MOTIF 1 total 9 YGR041W 3 YLR286C 2 YNL079C 2 YER124C 1 YBR157C 1 MOTIF 1 total 0 MOTIF 2 total 10 YGR041W 2 YER124C 2 YDL127W 2 YNL328C 2 YLR286C 1 YNL079C 1 MOTIF 2 total 3.7 YNL328C 1.13 YLR286C 0.88 YER124C 0.86 YGR041W 0.73 YDL127W 0.1 MOTIF 3 total 7 YER124C 2 YGR041W 1 YLR286C 1 YDL127W 1 YNL328C 1 YBR157C 1 MOTIF 3 total 0 ADR1_S13_G10 MOTIF 1 ADR1 0.95 -9 - AFT2 0.93 -11 - RCS1 0.46 -11 - SPT23 0.89 -11 + MOTIF 2 ADR1 0 -5 - MOTIF 3 ADR1 0 2 - MOTIF 2 MOTIF 3 MOTIF 1 MOTIF 1 a:3 t:0.72 ADR1 a:0.67 t:0.29 MOTIF 2 a:5 t:3.56 ADR1 a:0.4 t:0 MOTIF 3 a:8 t:1.61 ADR1 a:0.25 t:0 MOTIF 1 15 a:18.06 1.2 t:9.92 0.66 ref:6 6.83 1.14 MOTIF 2 15 a:14.15 0.94 t:7.54 0.5 ref:6 6.83 1.14 MOTIF 3 15 a:11.55 0.77 t:9.88 0.66 ref:6 6.83 1.14 YIL146C YKL016C YNL100W YNR006W YDL119C YAL022C YJR141W YER133W YPL148C YPR109W MOTIF 1 total 3 YIL146C 2 YNR006W 1 MOTIF 1 total 0.72 YIL146C 0.61 YNL100W 0.11 MOTIF 2 total 5 YER133W 2 YKL016C 1 YNR006W 1 YDL119C 1 MOTIF 2 total 3.56 YIL146C 1.09 YDL119C 0.92 YER133W 0.78 YAL022C 0.42 YJR141W 0.12 YPL148C 0.1 YNR006W 0.07 YNL100W 0.06 MOTIF 3 total 8 YAL022C 2 YER133W 2 YIL146C 1 YKL016C 1 YNL100W 1 YNR006W 1 MOTIF 3 total 1.61 YDL119C 0.56 YIL146C 0.35 YER133W 0.35 YAL022C 0.3 YKL016C 0.05 CAD1_S9_G9 MOTIF 1 ARR1 0.39 -3 + CAD1 1 -4 - YAP1 1 -5 - YAP3 0.39 -3 + YAP5 0.39 -3 + YAP6 1 -3 + YAP7 1 -2 + MOTIF 2 CAD1 0 -11 + HAP3 0.26 1 - RFX1 0.49 9 - STB1 0.92 0 - SWI4 0.83 -1 - SWI6 0.99 -5 + MOTIF 3 CAD1 0.01 -11 + RFX1 0.46 -11 - MOTIF 1 ARR1 0.36 -3 + CAD1 1 -4 - YAP1 1 -5 - YAP3 0.36 -3 + YAP5 0.36 -3 + YAP6 1 -3 + YAP7 1 -2 + MOTIF 3 SFP1 0.92 -3 + THI2 0.5 0 + MOTIF 2 MOTIF 1 a:12 t:9.25 YAP7 a:0.75 t:0.78 CAD1 a:0.75 t:0.78 YAP1 a:0.33 t:0.38 GCN4 a:0.08 t:0 YAP6 a:0.08 t:0.1 MOTIF 2 a:5 t:0 SWI4 a:0.4 t:0 MBP1 a:0.4 t:0 MOTIF 3 a:4 t:2.24 MOTIF 1 15 a:15.87 1.06 t:16.15 1.08 ref:10 12.72 1.27 MOTIF 2 15 a:17.79 1.19 t:0 0 ref:10 12.72 1.27 MOTIF 3 15 a:18.19 1.21 t:9.94 0.66 ref:10 12.72 1.27 YKL040C YGR234W YJL101C YKR052C YKL103C YPR048W YMR038C YKL086W YKR071C MOTIF 1 total 12 YGR234W 2 YKL103C 2 YMR038C 2 YJL101C 1 YPR048W 1 YKL086W 1 YKR071C 1 YKL040C 1 YKR052C 1 MOTIF 1 total 9.25 YGR234W 1.76 YMR038C 1.5 YJL101C 0.91 YPR048W 0.91 YKL040C 0.91 YKR052C 0.91 YKR071C 0.91 YKL086W 0.84 YKL103C 0.6 MOTIF 2 total 5 YKL103C 2 YJL101C 1 YPR048W 1 YKR052C 1 MOTIF 2 total 0 MOTIF 3 total 4 YKR071C 2 YKL040C 1 YMR038C 1 MOTIF 3 total 2.24 YKL103C 0.75 YKR071C 0.44 YGR234W 0.38 YKL040C 0.35 YJL101C 0.32 DAL80_S9_G8 MOTIF 1 DAL80 0.03 -1 - SPT23 0.25 -1 + MOTIF 2 DAL80 0.03 -4 - MOTIF 3 DAL80 0 -11 + MOTIF 2 MOTIF 1 MOTIF 3 MOTIF 1 a:6 t:5.75 MOTIF 2 a:2 t:2.15 MOTIF 3 a:6 t:5.03 MOTIF 1 15 a:18.84 1.26 t:8.51 0.57 ref:5 8.6 1.72 MOTIF 2 15 a:23.44 1.56 t:14.36 0.96 ref:5 8.6 1.72 MOTIF 3 15 a:14.51 0.97 t:10.79 0.72 ref:5 8.6 1.72 YOR093C YLR082C YOL042W YDL049C YHR091C YMR257C YDR042C YDR127W MOTIF 1 total 6 YDR042C 4 YDR127W 1 YMR257C 1 MOTIF 1 total 5.75 YDR042C 1.85 YDL049C 1.14 YMR257C 1.09 YDR127W 0.68 YHR091C 0.57 YLR082C 0.24 YOR093C 0.18 MOTIF 2 total 2 YMR257C 1 YDR042C 1 MOTIF 2 total 2.15 YDR042C 0.8 YLR082C 0.66 YDL049C 0.47 YDR127W 0.12 YHR091C 0.05 YMR257C 0.05 MOTIF 3 total 6 YDL049C 2 YLR082C 1 YHR091C 1 YDR127W 1 YDR042C 1 MOTIF 3 total 5.03 YDR042C 1.82 YDL049C 1.03 YDR127W 0.83 YMR257C 0.5 YHR091C 0.45 YOR093C 0.22 YLR082C 0.18 GAL4_S13_G9 MOTIF 1 ADR1 1 -8 + GAL4 0 -8 + MOTIF 2 GAL4 0.01 -10 + RGT1 0.29 -3 - MOTIF 3 GAL4 0.01 -10 - PDR1 0.29 -2 + PDR3 0.57 -6 - RGT1 0.94 -10 - MOTIF 2 RGT1 0.79 -3 - MOTIF 3 MOTIF 1 PUT3 0.5 -2 + MOTIF 1 a:7 t:6.29 GAL4 a:0.57 t:0.78 GAL80 a:0.14 t:0.12 MOTIF 2 a:12 t:7.93 GAL4 a:0.58 t:0.75 GAL80 a:0.17 t:0.17 MOTIF 3 a:9 t:7.1 GAL4 a:0.33 t:0.76 PDR1 a:0.11 t:0 MOTIF 1 15 a:13.27 0.88 t:4.99 0.33 ref:17 7.33 0.43 MOTIF 2 15 a:12.37 0.82 t:9.96 0.66 ref:17 7.33 0.43 MOTIF 3 15 a:11.24 0.75 t:9.21 0.61 ref:17 7.33 0.43 YDR009W YOR120W YOR138C YDR277C YNL073W YGL134W YML051W YBR019C YBR018C MOTIF 1 total 7 YOR138C 2 YGL134W 1 YBR019C 1 YDR277C 1 YBR018C 1 YNL073W 1 MOTIF 1 total 6.29 YBR019C 1.37 YBR018C 1.36 YDR009W 1.08 YOR138C 0.78 YML051W 0.57 YNL073W 0.42 YOR120W 0.3 YDR277C 0.24 YGL134W 0.17 MOTIF 2 total 12 YBR019C 4 YBR018C 3 YOR138C 2 YDR009W 1 YML051W 1 YDR277C 1 MOTIF 2 total 7.93 YBR019C 2.33 YBR018C 1.82 YOR138C 1.38 YML051W 0.88 YDR009W 0.79 YNL073W 0.55 YGL134W 0.18 MOTIF 3 total 9 YOR120W 3 YDR277C 2 YDR009W 1 YOR138C 1 YNL073W 1 YBR018C 1 MOTIF 3 total 7.1 YBR019C 1.76 YDR009W 1.51 YBR018C 1.35 YOR138C 1.05 YML051W 0.68 YNL073W 0.41 YDR277C 0.15 YGL134W 0.12 YOR120W 0.07 GAL80_S3_G1 MOTIF 1 ADR1 0.38 -3 - GAL80 0.01 5 + RGT1 0.31 -3 - MOTIF 2 GAL80 0 7 - GCR1 0.51 -9 + MOTIF 3 GAL80 0 -11 + MOTIF 3 MOTIF 2 MOTIF 1 GAL4 0.32 5 + MOTIF 1 a:3 t:1.01 GAL4 a:0.67 t:0.94 GAL80 a:0.33 t:0.94 MOTIF 2 a:2 t:1.31 GAL4 a:1 t:1 GAL80 a:1 t:1 MOTIF 3 a:3 t:2.19 MOTIF 1 15 a:15.36 1.02 t:15.87 1.06 ref:17 10.32 0.61 MOTIF 2 15 a:20.97 1.4 t:16.2 1.08 ref:17 10.32 0.61 MOTIF 3 15 a:19.35 1.29 t:15.69 1.05 ref:17 10.32 0.61 YBR019C MOTIF 1 total 3 YBR019C 3 MOTIF 1 total 1.01 YBR019C 1.01 MOTIF 2 total 2 YBR019C 2 MOTIF 2 total 1.31 YBR019C 1.31 MOTIF 3 total 3 YBR019C 3 MOTIF 3 total 2.19 YBR019C 2.19 GAT1_S15_G7 MOTIF 1 GAT1 0 -11 - MOTIF 2 DAL80 1 -1 + DAL82 1 -1 + GAT1 1 0 + GLN3 1 -1 + GZF3 1 -1 + MOTIF 3 GAT1 0 -9 - MET4 0.38 -8 - MOTIF 2 DAL80 1 -1 - DAL82 1 -1 - GAT1 1 0 - GLN3 1 -1 - GZF3 1 -1 - MOTIF 3 DAL80 0.93 1 + DAL82 0.5 1 + GAT1 0.93 2 + GLN3 0.98 1 + GZF3 0.64 1 + MOTIF 1 MOTIF 1 a:5 t:0 MOTIF 2 a:12 t:9.46 GAT1 a:0.67 t:0.54 DAL82 a:0.42 t:0.36 GLN3 a:0.17 t:0.19 MOTIF 3 a:16 t:6.54 GAT1 a:0.19 t:0.49 SPT23 a:0.13 t:0 GZF3 a:0.06 t:0 MOTIF 1 15 a:15.58 1.04 t:0 0 ref:7 10.86 1.55 MOTIF 2 15 a:14.29 0.95 t:12.42 0.83 ref:7 10.86 1.55 MOTIF 3 15 a:10.62 0.71 t:7.28 0.49 ref:7 10.86 1.55 YJR011C YDL237W YML098W YLR023C YIR029W YJL110C YEL062W MOTIF 1 total 5 YJR011C 4 YLR023C 1 MOTIF 1 total 0 MOTIF 2 total 12 YEL062W 4 YDL237W 3 YIR029W 2 YJL110C 2 YLR023C 1 MOTIF 2 total 9.46 YDL237W 2.54 YEL062W 2.34 YIR029W 1.95 YLR023C 0.96 YJL110C 0.78 YJR011C 0.6 YML098W 0.29 MOTIF 3 total 16 YJR011C 5 YEL062W 4 YLR023C 3 YML098W 2 YDL237W 1 YJL110C 1 MOTIF 3 total 6.54 YDL237W 1.61 YEL062W 1.52 YIR029W 1.24 YJR011C 0.76 YLR023C 0.69 YJL110C 0.5 YML098W 0.22 GCR1_S7_G4 MOTIF 1 GCR1 1 -4 + MOTIF 2 GCR1 0.88 3 - HAP1 0.26 -11 + PHO4 0.99 -3 - MOTIF 3 GCR1 0 -8 + MOTIF 1 GCR1 1 -4 + MOTIF 2 HAP1 0.87 -11 + PHO4 0.96 -3 - MOTIF 3 MOTIF 1 a:9 t:5.27 GCR1 a:0.67 t:0.39 HSF1 a:0.11 t:0.16 MOTIF 2 a:3 t:4.21 TYE7 a:0.33 t:0.35 MOTIF 3 a:5 t:0 MOTIF 1 15 a:16.27 1.08 t:13.96 0.93 ref:9 14.6 1.62 MOTIF 2 15 a:21.43 1.43 t:12.97 0.86 ref:9 14.6 1.62 MOTIF 3 15 a:16.79 1.12 t:0 0 ref:9 14.6 1.62 YGR192C YAL038W YLR044C YER177W MOTIF 1 total 9 YER177W 4 YGR192C 2 YAL038W 2 YLR044C 1 MOTIF 1 total 5.27 YER177W 1.78 YGR192C 1.52 YAL038W 1.02 YLR044C 0.95 MOTIF 2 total 3 YAL038W 2 YLR044C 1 MOTIF 2 total 4.21 YER177W 1.89 YAL038W 1.44 YLR044C 0.88 MOTIF 3 total 5 YAL038W 3 YLR044C 2 MOTIF 3 total 0 GZF3_S3_G3 MOTIF 1 ADR1 0.51 -4 - GZF3 0 -7 - MOTIF 2 GZF3 0.08 -7 - PHD1 0.4 0 - SOK2 0.98 -9 + MOTIF 3 DAL80 0.81 -2 + GAT1 0.63 -1 + GLN3 0.32 -2 + GZF3 0.74 -2 + MOTIF 1 ADR1 0.47 -4 - MOTIF 2 PHD1 0.43 0 + SOK2 0.95 -2 + MOTIF 3 MOTIF 1 a:2 t:1.75 MOTIF 2 a:4 t:2.17 SOK2 a:0.75 t:0.64 AZF1 a:0.25 t:0.24 SPT23 a:0.25 t:0.13 MOTIF 3 a:3 t:0.83 MOTIF 1 15 a:21.76 1.45 t:21.83 1.46 ref:6 10.32 1.72 MOTIF 2 15 a:20.35 1.36 t:19.35 1.29 ref:6 10.32 1.72 MOTIF 3 15 a:21.99 1.47 t:22.03 1.47 ref:6 10.32 1.72 YLL048C YPR171W YLR023C MOTIF 1 total 2 YLR023C 2 MOTIF 1 total 1.75 YLR023C 1.75 MOTIF 2 total 4 YLR023C 3 YPR171W 1 MOTIF 2 total 2.17 YLR023C 1.38 YPR171W 0.79 MOTIF 3 total 3 YPR171W 2 YLR023C 1 MOTIF 3 total 0.83 YPR171W 0.54 YLR023C 0.29 HAP2_S21_G17 MOTIF 1 HAP2 1 -6 + HAP3 1 -6 + HAP4 1 -4 + HAP5 1 -6 + MOTIF 2 DAL81 0.47 5 + HAP2 0 1 - YDR026c 0.6 3 + MOTIF 3 DAL80 0.27 -9 - GZF3 0.7 -9 - HAP2 0 0 + MOTIF 2 MOTIF 1 HAP2 1 -6 + HAP3 1 -6 + HAP4 1 -4 + HAP5 1 -6 + MOTIF 3 MOTIF 1 a:15 t:6.72 HAP2 a:1 t:0.67 HAP5 a:0.67 t:0.44 HAP3 a:0.53 t:0.35 HAP4 a:0.13 t:0.15 MOTIF 2 a:12 t:7.89 DAL81 a:0.08 t:0.12 MOTIF 3 a:13 t:8.79 YAP7 a:0.08 t:0.02 CAD1 a:0.08 t:0.02 YAP6 a:0.08 t:0.02 MOTIF 1 15 a:14.74 0.98 t:8.67 0.58 ref:5 8.61 1.72 MOTIF 2 15 a:10.82 0.72 t:10.29 0.69 ref:5 8.61 1.72 MOTIF 3 15 a:11.47 0.76 t:4.88 0.33 ref:5 8.61 1.72 YLL027W YPR145W YGR019W YGR234W YOL077W-A YDL170W YHR051W YER174C YDR529C YGL187C YLL018C YGR121C YDR377W YIR030C YPL207W YLR220W YFR033C MOTIF 1 total 15 YER174C 2 YLR220W 2 YLL027W 1 YGR234W 1 YPR145W 1 YDL170W 1 YOL077W-A 1 YDR529C 1 YGL187C 1 YGR121C 1 YIR030C 1 YPL207W 1 YFR033C 1 MOTIF 1 total 6.72 YOL077W- 0.88 YLR220W 0.81 YGL187C 0.7 YGR234W 0.62 YFR033C 0.62 YDR529C 0.5 YPL207W 0.47 YPR145W 0.41 YER174C 0.4 YGR121C 0.37 YGR019W 0.32 YDL170W 0.29 YLL027W 0.15 YDR377W 0.13 YIR030C 0.05 MOTIF 2 total 12 YFR033C 5 YPR145W 2 YLL027W 1 YGR019W 1 YOL077W-A 1 YDR529C 1 YDR377W 1 MOTIF 2 total 7.89 YFR033C 2.43 YOL077W- 0.91 YGR019W 0.91 YDR529C 0.9 YLL027W 0.83 YDR377W 0.83 YPR145W 0.52 YGR234W 0.38 YIR030C 0.18 MOTIF 3 total 13 YOL077W-A 4 YGR234W 2 YPR145W 2 YLL027W 1 YGR019W 1 YGL187C 1 YLL018C 1 YGR121C 1 MOTIF 3 total 8.79000000000001 YOL077W- 1.34 YGR234W 1.21 YFR033C 1.1 YGR121C 0.9 YLL027W 0.87 YGL187C 0.87 YGR019W 0.79 YPR145W 0.34 YPL207W 0.3 YLR220W 0.28 YDR529C 0.27 YDL170W 0.22 YLL018C 0.17 YER174C 0.08 YIR030C 0.05 HAP3_S13_G11 MOTIF 1 HAP2 1 -6 - HAP3 1 -6 - HAP4 1 -4 - HAP5 1 -6 - MOTIF 2 DAL80 0.89 -7 - HAP3 0 -1 - MOTIF 3 HAP3 0 -7 + MOTIF 1 HAP2 1 -6 - HAP3 1 -6 - HAP4 1 -4 - HAP5 1 -6 - YHP1 0.27 -2 + MOTIF 2 SPT2 0.57 4 + MOTIF 3 MOTIF 1 a:10 t:8.21 HAP3 a:1 t:0.87 HAP2 a:0.8 t:0.67 HAP5 a:0.7 t:0.56 HAP4 a:0.1 t:0.11 MOTIF 2 a:5 t:7.9 MOTIF 3 a:6 t:6.7 GCN4 a:0.17 t:0.09 MOTIF 1 15 a:15.53 1.04 t:12.99 0.87 ref:5 8.61 1.72 MOTIF 2 15 a:18.37 1.22 t:13.66 0.91 ref:5 8.61 1.72 MOTIF 3 15 a:16.74 1.12 t:11.2 0.75 ref:5 8.61 1.72 YDL170W YER174C YBR039W YNL009W YCR028C YLR220W YLL027W YHR051W YPL207W YML119W YGL187C MOTIF 1 total 10 YER174C 2 YLR220W 2 YDL170W 1 YBR039W 1 YPL207W 1 YLL027W 1 YML119W 1 YGL187C 1 MOTIF 1 total 8.21 YLL027W 1.71 YDL170W 1.19 YER174C 0.92 YBR039W 0.91 YPL207W 0.91 YLR220W 0.91 YGL187C 0.91 YML119W 0.75 MOTIF 2 total 5 YDL170W 2 YLR220W 1 YLL027W 1 YML119W 1 MOTIF 2 total 7.9 YLL027W 2.87 YDL170W 2.29 YLR220W 1.35 YML119W 0.83 YCR028C 0.25 YBR039W 0.19 YGL187C 0.07 YNL009W 0.05 MOTIF 3 total 6 YDL170W 2 YER174C 1 YNL009W 1 YLR220W 1 YLL027W 1 MOTIF 3 total 6.7 YLL027W 2.69 YDL170W 1.78 YLR220W 1.33 YML119W 0.73 YBR039W 0.06 YCR028C 0.06 YNL009W 0.05 HAP5_S21_G16 MOTIF 1 HAP2 1 -1 - HAP3 1 -1 - HAP4 1 1 - HAP5 1 -1 - YHP1 0.49 -7 + MOTIF 2 HAP5 0 -11 + MOTIF 3 CAD1 0.42 -4 - HAP5 0 -1 - YAP6 0.69 -5 - MOTIF 3 ROX1 0.99 3 + SPT2 0.58 6 - SPT23 0.31 4 - MOTIF 1 MOTIF 2 MOTIF 1 a:15 t:10.97 HAP5 a:0.67 t:0.09 HAP2 a:0.53 t:0.03 HAP3 a:0.4 t:0.03 HAP4 a:0.2 t:0.05 MOTIF 2 a:16 t:9.48 NRG1 a:0.06 t:0.01 SKN7 a:0.06 t:0 MOTIF 3 a:12 t:7.45 YAP7 a:0.08 t:0 CAD1 a:0.08 t:0 YAP6 a:0.08 t:0 MOTIF 1 15 a:13.38 0.89 t:4.24 0.28 ref:5 8.61 1.72 MOTIF 2 15 a:10.82 0.72 t:3.47 0.23 ref:5 8.61 1.72 MOTIF 3 15 a:13.84 0.92 t:14.86 0.99 ref:5 8.61 1.72 YLL027W YIL013C YDR529C YPL207W YDR077W YPR145W YGR234W YKL182W YGL187C YLR220W YHR051W YHR006W YBL099W YFL027C YER174C YDR384C MOTIF 1 total 15 YPR145W 3 YLL027W 2 YLR220W 2 YBL099W 2 YGL187C 1 YDR529C 1 YPL207W 1 YDR077W 1 YER174C 1 YDR384C 1 MOTIF 1 total 10.97 YDR384C 2.13 YKL182W 1.37 YGL187C 1.36 YBL099W 1.28 YPR145W 1.15 YDR077W 1.11 YDR529C 0.68 YGR234W 0.66 YLL027W 0.51 YLR220W 0.28 YER174C 0.21 YHR006W 0.14 YIL013C 0.09 MOTIF 2 total 16 YDR384C 6 YKL182W 3 YBL099W 2 YIL013C 1 YDR529C 1 YDR077W 1 YHR006W 1 YPR145W 1 MOTIF 2 total 9.48000000000001 YPR145W 1.55 YDR384C 1.47 YGL187C 1.34 YKL182W 1.26 YBL099W 1.2 YGR234W 0.99 YDR529C 0.63 YDR077W 0.51 YLL027W 0.2 YER174C 0.2 YLR220W 0.07 YIL013C 0.06 MOTIF 3 total 12 YLR220W 3 YBL099W 2 YGR234W 2 YKL182W 2 YGL187C 1 YLL027W 1 YHR006W 1 MOTIF 3 total 7.45 YPR145W 3.35 YGR234W 0.91 YIL013C 0.86 YKL182W 0.76 YDR384C 0.72 YBL099W 0.68 YER174C 0.1 YHR006W 0.07 INO4_S24_G19 MOTIF 1 INO2 1 -5 + INO4 1 -4 - SPT23 0.99 -10 - MOTIF 2 INO4 0 6 - MOTIF 3 INO4 0 -10 + MOTIF 1 INO2 1 -5 - INO4 1 -4 + SPT23 0.98 -10 + MOTIF 3 MOTIF 2 MOTIF 1 a:23 t:19.8 INO4 a:0.96 t:0.96 INO2 a:0.43 t:0.46 MOTIF 2 a:12 t:0 FKH2 a:0.08 t:0 FKH1 a:0.08 t:0 MOTIF 3 a:12 t:8.45 CBF1 a:0.08 t:0 SOK2 a:0.08 t:0.03 MOTIF 1 15 a:16.08 1.07 t:16.28 1.09 ref:10 11.23 1.12 MOTIF 2 15 a:14.95 1 t:0 0 ref:10 11.23 1.12 MOTIF 3 15 a:12.11 0.81 t:4.53 0.3 ref:10 11.23 1.12 YNR017W YJL167W YER026C YNL169C YER043C YDR050C YPL231W YKL182W YEL040W YBL106C YPR013C YDR497C YGR157W YBR029C YOR316C YDR146C YJL048C YHR123W YJR104C MOTIF 1 total 23 YGR157W 3 YKL182W 2 YDR497C 2 YJR104C 2 YNR017W 1 YER026C 1 YJL167W 1 YER043C 1 YNL169C 1 YDR050C 1 YPL231W 1 YBR029C 1 YDR146C 1 YJL048C 1 YBL106C 1 YEL040W 1 YPR013C 1 YHR123W 1 MOTIF 1 total 19.8 YGR157W 2.85 YKL182W 1.82 YDR497C 1.82 YJR104C 1.26 YNL169C 1.05 YNR017W 0.91 YJL167W 0.91 YDR050C 0.91 YPL231W 0.91 YPR013C 0.91 YBR029C 0.91 YDR146C 0.91 YHR123W 0.91 YER026C 0.82 YJL048C 0.8 YEL040W 0.75 YER043C 0.71 YBL106C 0.64 MOTIF 2 total 12 YER043C 3 YPR013C 2 YER026C 1 YJL167W 1 YBR029C 1 YDR146C 1 YKL182W 1 YBL106C 1 YGR157W 1 MOTIF 2 total 0 MOTIF 3 total 12 YJL167W 2 YNL169C 2 YJL048C 2 YPR013C 2 YNR017W 1 YER043C 1 YBR029C 1 YKL182W 1 MOTIF 3 total 8.45 YNR017W 1.88 YPR013C 1.8 YKL182W 1.24 YJL167W 0.63 YJR104C 0.61 YER026C 0.59 YPL231W 0.52 YJL048C 0.46 YBR029C 0.25 YDR497C 0.22 YBL106C 0.16 YHR123W 0.09 LEU3_S11_G9 MOTIF 1 GAL4 0.99 -5 - GAL80 0.91 -5 - LEU3 1 2 - PUT3 0.98 8 + MOTIF 2 LEU3 0 -9 - MOTIF 3 LEU3 0 -9 - MOTIF 1 GAL4 0.99 -5 - GAL80 0.92 -5 - LEU3 1 2 - PUT3 0.99 8 + MOTIF 3 MOTIF 2 MOTIF 1 a:11 t:10.35 LEU3 a:0.91 t:0.91 MOTIF 2 a:9 t:0 AFT2 a:0.11 t:0 MOTIF 3 a:4 t:1.32 MOTIF 1 15 a:13.85 0.92 t:12.34 0.82 ref:10 10.82 1.08 MOTIF 2 15 a:16.55 1.1 t:0 0 ref:10 10.82 1.08 MOTIF 3 15 a:19.21 1.28 t:15.57 1.04 ref:10 10.82 1.08 YJR016C YMR108W YLR356W YKL120W YOR226C YOR271C YNL104C YGL009C YBR068C MOTIF 1 total 11 YKL120W 2 YGL009C 2 YJR016C 1 YMR108W 1 YLR356W 1 YOR226C 1 YOR271C 1 YNL104C 1 YBR068C 1 MOTIF 1 total 10.35 YGL009C 1.82 YKL120W 1.82 YLR356W 1.25 YMR108W 0.91 YOR271C 0.91 YBR068C 0.91 YJR016C 0.91 YNL104C 0.91 YOR226C 0.91 MOTIF 2 total 9 YNL104C 5 YMR108W 1 YOR226C 1 YBR068C 1 YGL009C 1 MOTIF 2 total 0 MOTIF 3 total 4 YOR271C 4 MOTIF 3 total 1.32 YOR271C 0.38 YLR356W 0.27 YGL009C 0.19 YNL104C 0.19 YBR068C 0.18 YKL120W 0.11 MAC1_S5_G4 MOTIF 1 AFT2 1 -8 - MAC1 0.03 -10 - RCS1 1 -8 - SOK2 0.93 -11 - MOTIF 2 ACE2 0.9 -11 + MAC1 0.77 1 - MOTIF 3 HSF1 0.97 -10 + MAC1 0 -10 - MOTIF 2 ACE2 0.81 -11 - MAC1 0.69 1 + MOTIF 1 AFT2 1 -8 - RCS1 1 -8 - SOK2 0.92 -11 - MOTIF 3 MOTIF 1 a:3 t:2.54 AFT2 a:0.33 t:0.37 RCS1 a:0.33 t:0.37 MOTIF 2 a:4 t:2.67 SUT1 a:0.25 t:0.04 MAC1 a:0.25 t:0.32 MOTIF 3 a:2 t:0.41 AFT2 a:0.5 t:0.51 RCS1 a:0.5 t:0.51 HAP1 a:0.5 t:0 MOTIF 1 15 a:20.92 1.39 t:19.46 1.3 ref:7 12.06 1.72 MOTIF 2 15 a:18.53 1.24 t:18.13 1.21 ref:7 12.06 1.72 MOTIF 3 15 a:21.07 1.4 t:18.21 1.21 ref:7 12.06 1.72 YPL177C YPR124W YJR050W YER145C MOTIF 1 total 3 YER145C 2 YPL177C 1 MOTIF 1 total 2.54 YER145C 1.75 YPL177C 0.79 MOTIF 2 total 4 YPL177C 1 YPR124W 1 YJR050W 1 YER145C 1 MOTIF 2 total 2.67 YER145C 1.15 YPR124W 0.85 YJR050W 0.57 YPL177C 0.1 MOTIF 3 total 2 YER145C 2 MOTIF 3 total 0.41 YER145C 0.3 YPL177C 0.11 MET31_S5_G4 MOTIF 1 MET31 0.41 -11 + MET32 0.65 -11 + SPT23 0.4 -11 + YAP6 0.46 1 + MOTIF 2 MET31 0 -8 + RDS1 0.33 -8 - YDR026c 0.72 6 + MOTIF 3 MET31 0.99 0 + MET32 0.98 0 + MET4 1 2 + PHO4 0.76 -9 - SNT2 0.63 -9 + MOTIF 2 RDS1 0.36 -8 - YDR026c 0.7 6 + MOTIF 3 CBF1 1 -8 + INO2 0.97 -9 + INO4 0.35 -9 + PHO4 1 -9 + SKO1 0.76 -1 - TYE7 1 1 - MOTIF 1 MOTIF 1 a:4 t:1.43 MET4 a:0.25 t:0.29 MOTIF 2 a:3 t:2.54 MOTIF 3 a:4 t:3.11 CBF1 a:0.5 t:0.95 MET32 a:0.5 t:0 MET4 a:0.5 t:0 MET31 a:0.5 t:0 MOTIF 1 15 a:18.19 1.21 t:8.89 0.59 ref:9 15.5 1.72 MOTIF 2 15 a:18.44 1.23 t:18.55 1.24 ref:9 15.5 1.72 MOTIF 3 15 a:18.66 1.24 t:15.83 1.06 ref:9 15.5 1.72 YLR179C YER092W YNL277W YAL012W MOTIF 1 total 4 YER092W 2 YLR179C 2 MOTIF 1 total 1.43 YLR179C 0.84 YER092W 0.59 MOTIF 2 total 3 YER092W 2 YLR179C 1 MOTIF 2 total 2.54 YER092W 1.63 YLR179C 0.91 MOTIF 3 total 4 YLR179C 1 YER092W 1 YAL012W 1 YNL277W 1 MOTIF 3 total 3.11 YER092W 1.74 YNL277W 0.89 YAL012W 0.48 MET32_S13_G10 MOTIF 1 CBF1 1 -5 - MET32 0 -11 - PHO4 1 -6 - RTG3 0.45 -3 - SKO1 0.41 -2 - TYE7 1 -2 + MOTIF 2 MET32 0 -4 + YAP1 0.96 -10 - YAP6 0.43 2 + MOTIF 3 MET32 0 4 - MOTIF 1 CBF1 1 -5 + PHO4 1 -6 + RTG3 0.53 -3 + SKO1 0.49 -2 + TYE7 1 -2 - MOTIF 2 MOTIF 3 MOTIF 1 a:10 t:9.07 CBF1 a:0.8 t:0.8 TYE7 a:0.1 t:0.1 MOTIF 2 a:2 t:0 MOTIF 3 a:12 t:0 MET31 a:0.08 t:0 MET32 a:0.08 t:0 MOTIF 1 15 a:16.84 1.12 t:16.19 1.08 ref:9 15.5 1.72 MOTIF 2 15 a:19.97 1.33 t:0 0 ref:9 15.5 1.72 MOTIF 3 15 a:14.2 0.95 t:0 0 ref:9 15.5 1.72 YAL012W YJR009C YNL277W YER092W YBR213W YLR092W YLR179C YDL059C YGR055W YKL001C MOTIF 1 total 10 YER092W 2 YLR092W 2 YJR009C 1 YBR213W 1 YDL059C 1 YKL001C 1 YAL012W 1 YNL277W 1 MOTIF 1 total 9.07 YER092W 1.82 YLR092W 1.8 YJR009C 0.91 YDL059C 0.91 YAL012W 0.91 YBR213W 0.91 YKL001C 0.91 YNL277W 0.9 MOTIF 2 total 2 YJR009C 2 MOTIF 2 total 0 MOTIF 3 total 12 YBR213W 4 YNL277W 2 YLR092W 2 YJR009C 1 YGR055W 1 YKL001C 1 YAL012W 1 MOTIF 3 total 0 MET4_S5_G5 MOTIF 1 CBF1 1 -8 - INO2 0.99 -9 - INO4 0.64 -9 - MET4 0.03 10 - PHO4 1 -9 - SKO1 0.74 -1 + SNT2 0.58 -9 + TYE7 1 1 + MOTIF 2 MET31 1 -1 + MET32 1 -1 + MET4 1 1 + MOTIF 3 FHL1 0.4 -10 + MET4 0 -8 - SFP1 0.77 5 - STB5 0.39 6 - MOTIF 2 MET31 1 -1 + MET32 1 -1 + MET4 0.98 1 + MOTIF 1 MOTIF 3 MOTIF 1 a:2 t:0 CBF1 a:1 t:0 MOTIF 2 a:5 t:0.81 MET31 a:0.8 t:0 MET4 a:0.8 t:0 MET32 a:0.8 t:0 MOTIF 3 a:2 t:0 MOTIF 1 15 a:24.29 1.62 t:0 0 ref:15 17.65 1.18 MOTIF 2 15 a:18.55 1.24 t:21.33 1.42 ref:15 17.65 1.18 MOTIF 3 15 a:26.95 1.8 t:0 0 ref:15 17.65 1.18 YER092W YLR179C YAL012W YNL277W YGL184C MOTIF 1 total 2 YER092W 1 YNL277W 1 MOTIF 1 total 0 MOTIF 2 total 5 YER092W 2 YAL012W 1 YLR179C 1 YGL184C 1 MOTIF 2 total 0.81 YGL184C 0.81 MOTIF 3 total 2 YNL277W 1 YGL184C 1 MOTIF 3 total 0 MOT3_S11_G8 MOTIF 1 MOT3 0 -11 + MOTIF 2 MOT3 0 -7 + RTG3 0.57 2 + SKO1 0.99 -3 - MOTIF 3 MOT3 0 -9 - RTG3 0.61 -11 - MOTIF 1 ADR1 0.88 0 - MSN4 0.53 1 - MOTIF 3 SUT1 0.43 -2 + MOTIF 2 MOTIF 1 a:8 t:4.04 AFT2 a:0.63 t:0.28 RCS1 a:0.25 t:0.28 NRG1 a:0.13 t:0.09 MOTIF 2 a:5 t:0.15 MOTIF 3 a:8 t:4.4 SKN7 a:0.25 t:0.29 AFT2 a:0.13 t:0.09 RTG3 a:0.13 t:0.02 MOT3 a:0.13 t:0 RCS1 a:0.13 t:0 MOTIF 1 15 a:12.01 0.8 t:11.41 0.76 ref:6 8.06 1.34 MOTIF 2 15 a:17.83 1.19 t:14.92 0.99 ref:6 8.06 1.34 MOTIF 3 15 a:14.13 0.94 t:8.68 0.58 ref:6 8.06 1.34 YKR042W YDR077W YEL060C YMR106C YIL119C YGR142W YPL135W YNL036W MOTIF 1 total 8 YPL135W 3 YEL060C 2 YDR077W 1 YMR106C 1 YIL119C 1 MOTIF 1 total 4.04 YMR106C 0.9 YEL060C 0.77 YPL135W 0.68 YNL036W 0.65 YIL119C 0.52 YDR077W 0.38 YKR042W 0.14 MOTIF 2 total 5 YPL135W 2 YNL036W 2 YEL060C 1 MOTIF 2 total 0.15 YMR106C 0.05 YNL036W 0.05 YPL135W 0.05 MOTIF 3 total 8 YKR042W 4 YNL036W 2 YEL060C 1 YIL119C 1 MOTIF 3 total 4.4 YKR042W 1.4 YDR077W 0.89 YEL060C 0.72 YPL135W 0.6 YNL036W 0.44 YGR142W 0.3 YMR106C 0.05 MSN2_S15_G15 MOTIF 1 DAL80 0.68 -1 - MSN2 0 -11 + YAP6 0.25 -9 + YOX1 0.59 1 - MOTIF 2 MSN2 1 -6 + MSN4 1 -6 + MOTIF 3 MSN2 0 -10 + MOTIF 2 ADR1 0.37 -7 + MSN2 1 -6 + MSN4 1 -6 + MOTIF 3 MOTIF 1 MOTIF 1 a:5 t:0 SWI6 a:0.2 t:0 SWI4 a:0.2 t:0 MOTIF 2 a:18 t:6.53 MSN2 a:0.44 t:0.71 MSN4 a:0.11 t:0.14 MOTIF 3 a:10 t:0.05 MOTIF 1 15 a:17.81 1.19 t:0 0 ref:9 11.67 1.3 MOTIF 2 15 a:11.55 0.77 t:14.67 0.98 ref:9 11.67 1.3 MOTIF 3 15 a:14.96 1 t:30 2 ref:9 11.67 1.3 YOL114C YMR087W YKL085W YDR032C YKR066C YER177W YPR160W YDR171W YGR256W YLR258W YJR046W YGR088W YKL063C YJL164C MOTIF 1 total 5 YMR087W 2 YOL114C 1 YJR046W 1 YER177W 1 MOTIF 1 total 0 MOTIF 2 total 18 YLR258W 3 YER177W 2 YPR160W 2 YDR171W 2 YJR046W 2 YGR088W 2 YKL085W 1 YDR032C 1 YKR066C 1 YGR256W 1 YJL164C 1 MOTIF 2 total 6.53 YLR258W 1.42 YJL164C 1.09 YGR256W 0.9 YKL085W 0.89 YJR046W 0.88 YER177W 0.81 YKL063C 0.17 YGR088W 0.14 YPR160W 0.12 YDR171W 0.11 MOTIF 3 total 10 YMR087W 4 YER177W 2 YPR160W 1 YGR088W 1 YKL063C 1 YJL164C 1 MOTIF 3 total 0.05 YPR160W 0.05 MSN4_S21_G17 MOTIF 1 MSN4 0 -11 + MOTIF 2 MSN4 0 3 + MOTIF 3 MET4 0.57 -10 + MSN4 0 1 + SPT23 0.3 -10 + MOTIF 1 RDS1 0.68 -4 + MOTIF 3 MOTIF 2 MOTIF 1 a:18 t:7.62 MOTIF 2 a:13 t:9.39 MOTIF 3 a:11 t:6.93 MOTIF 1 15 a:11.05 0.74 t:8.6 0.57 ref:7 9.44 1.35 MOTIF 2 15 a:12.55 0.84 t:9.84 0.66 ref:7 9.44 1.35 MOTIF 3 15 a:16.93 1.13 t:9.46 0.63 ref:7 9.44 1.35 YML100W-A_cer YOR226C_cer YKL085W_cer YKR066C_cer YMR119W_cer YGR192C_cer YPR065W_cer YDR258C_cer YMR251W-A_cer YGR088W_cer YGR052W_cer YIL051C_cer YOR018W_cer YAL005C_cer YBR072W_cer YHR087W_cer YNL241C_cer MOTIF 1 total 18 YPR065W_cer 3 YNL241C_cer 3 YKL085W_cer 2 YMR251W-A_cer 2 YGR088W_cer 2 YOR226C_cer 1 YKR066C_cer 1 YMR119W_cer 1 YGR052W_cer 1 YIL051C_cer 1 YAL005C_cer 1 MOTIF 1 total 7.62 YPR065W_ 1.92 YNL241C_ 1.68 YMR119W_ 0.79 YMR251W- 0.65 YGR052W_ 0.57 YGR088W_ 0.51 YKR066C_ 0.41 YOR226C_ 0.37 YIL051C_ 0.28 YKL085W_ 0.24 YAL005C_ 0.12 YML100W- 0.08 MOTIF 2 total 13 YNL241C_cer 4 YMR251W-A_cer 2 YBR072W_cer 2 YKL085W_cer 1 YKR066C_cer 1 YPR065W_cer 1 YGR052W_cer 1 YGR088W_cer 1 MOTIF 2 total 9.39000000000001 YMR251W- 2.14 YNL241C_ 2.11 YAL005C_ 1.19 YBR072W_ 1.02 YKL085W_ 0.8 YPR065W_ 0.71 YGR052W_ 0.69 YGR192C_ 0.21 YKR066C_ 0.17 YGR088W_ 0.16 YDR258C_ 0.11 YHR087W_ 0.08 MOTIF 3 total 11 YAL005C_cer 3 YPR065W_cer 2 YKL085W_cer 1 YMR251W-A_cer 1 YOR018W_cer 1 YBR072W_cer 1 YHR087W_cer 1 YNL241C_cer 1 MOTIF 3 total 6.93 YNL241C_ 1.6 YMR251W- 1.31 YBR072W_ 0.76 YPR065W_ 0.65 YAL005C_ 0.64 YKL085W_ 0.62 YGR052W_ 0.58 YGR192C_ 0.18 YOR226C_ 0.18 YDR258C_ 0.15 YKR066C_ 0.11 YGR088W_ 0.08 YHR087W_ 0.07 PHO2_S3_G3 MOTIF 1 CBF1 1 1 + INO2 1 0 + INO4 0.25 -9 - PHO2 0.34 -11 - PHO4 1 0 + TYE7 1 -8 - MOTIF 2 AFT2 0.57 -10 + PHO2 0.01 4 + RGT1 0.59 -10 - MOTIF 3 PHO2 0 -10 - RTG3 0.27 2 + SKO1 1 -3 - MOTIF 1 CBF1 1 1 + INO2 1 0 + INO4 0.35 -9 - PHO2 0.32 -11 - PHO4 1 0 + TYE7 1 -8 - MOTIF 3 MOTIF 2 MOTIF 1 a:4 t:3.54 CBF1 a:1 t:1 PHO4 a:1 t:1 PHO2 a:0.25 t:0.26 MOTIF 2 a:1 t:0.77 MOTIF 3 a:2 t:1.3 MOTIF 1 15 a:17.86 1.19 t:17.79 1.19 ref:11 14.51 1.32 MOTIF 2 15 a:21.61 1.44 t:17.12 1.14 ref:11 14.51 1.32 MOTIF 3 15 a:22.67 1.51 t:17.74 1.18 ref:11 14.51 1.32 YER035W YNL036W YHR137W MOTIF 1 total 4 YHR137W 4 MOTIF 1 total 3.54 YHR137W 3.54 MOTIF 2 total 1 YHR137W 1 MOTIF 2 total 0.77 YHR137W 0.55 YNL036W 0.22 MOTIF 3 total 2 YNL036W 2 MOTIF 3 total 1.3 YNL036W 1.23 YHR137W 0.07 PHO4_S21_G15 MOTIF 1 CBF1 1 -6 + PHO2 0.46 -9 + PHO4 1 -2 - MOTIF 2 PHO4 0 3 - MOTIF 3 PHO4 0 -11 - YAP6 0.36 -6 + MOTIF 1 CBF1 1 -6 - PHO2 0.55 -9 - PHO4 1 -7 - MOTIF 3 GAL4 0.46 6 - MET4 0.58 7 + PHO4 0.86 3 + MOTIF 2 MOTIF 1 a:18 t:17.06 PHO4 a:0.89 t:0.84 CBF1 a:0.5 t:0.47 INO2 a:0.06 t:0.05 PHO2 a:0.06 t:0.05 SUM1 a:0.06 t:0.05 MOTIF 2 a:7 t:0 CIN5 a:0.14 t:0 MOTIF 3 a:7 t:5.78 UME6 a:0.14 t:0 MOTIF 1 15 a:13.5 0.9 t:12.46 0.83 ref:7 9.25 1.32 MOTIF 2 15 a:16.19 1.08 t:0 0 ref:7 9.25 1.32 MOTIF 3 15 a:13.12 0.87 t:4.39 0.29 ref:7 9.25 1.32 YJR058C YDR441C YBR296C YCL035C YLR267W YGR253C YOR163W YPL018W YOL136C YGL133W YML121W YHR137W YJL117W YDR281C YEL001C MOTIF 1 total 18 YHR137W 4 YML121W 3 YBR296C 2 YPL018W 2 YJR058C 1 YDR441C 1 YCL035C 1 YOR163W 1 YOL136C 1 YDR281C 1 YJL117W 1 MOTIF 1 total 17.06 YHR137W 3.65 YML121W 2.56 YPL018W 1.83 YBR296C 1.77 YJR058C 1.35 YDR281C 1.3 YCL035C 0.91 YOL136C 0.91 YDR441C 0.88 YJL117W 0.88 YOR163W 0.85 YLR267W 0.11 YGR253C 0.06 MOTIF 2 total 7 YDR441C 2 YPL018W 2 YOL136C 1 YHR137W 1 YJL117W 1 MOTIF 2 total 0 MOTIF 3 total 7 YHR137W 3 YPL018W 1 YML121W 1 YJL117W 1 YEL001C 1 MOTIF 3 total 5.78 YHR137W 1.43 YPL018W 0.73 YML121W 0.73 YBR296C 0.71 YDR281C 0.47 YCL035C 0.37 YOL136C 0.37 YDR441C 0.34 YJR058C 0.32 YOR163W 0.31 PUT3_S4_G3 MOTIF 1 ADR1 0.87 1 + GCR1 0.43 -6 + PUT3 0.01 2 - MOTIF 2 FKH1 1 -2 + FKH2 1 -1 - PUT3 0 14 - MOTIF 3 PHO2 0.35 2 - PUT3 0 14 - MOTIF 3 PDR3 0.28 0 - MOTIF 1 ADR1 0.59 1 - MOTIF 2 MOTIF 1 a:3 t:3.09 PUT3 a:1 t:0.66 MOTIF 2 a:1 t:0 MOTIF 3 a:4 t:2.99 UME6 a:0.5 t:0.4 MOTIF 1 15 a:23.13 1.54 t:14.03 0.94 ref:18 10.32 0.57 MOTIF 2 15 a:22.72 1.51 t:0 0 ref:18 10.32 0.57 MOTIF 3 15 a:15.57 1.04 t:14.9 0.99 ref:18 10.32 0.57 YBL064C YHR037W YOR306C MOTIF 1 total 3 YBL064C 1 YHR037W 1 YOR306C 1 MOTIF 1 total 3.09 YBL064C 1.6 YOR306C 0.87 YHR037W 0.62 MOTIF 2 total 1 YBL064C 1 MOTIF 2 total 0 MOTIF 3 total 4 YBL064C 4 MOTIF 3 total 2.99 YBL064C 2.46 YOR306C 0.41 YHR037W 0.12 RDS1_S8_G7 MOTIF 1 HAP1 0.84 6 + LEU3 0.52 6 - RDS1 0 -11 + MOTIF 2 RDS1 1 1 + MOTIF 3 ADR1 1 -2 + MSN2 0.39 -10 + NRG1 1 3 - RDS1 0 -11 + MOTIF 1 HAP1 0.27 6 - NDD1 0.29 -8 - MOTIF 2 RDS1 0.93 -8 - MOTIF 3 RDS1 1 -8 + MOTIF 1 a:3 t:2.66 SKN7 a:0.33 t:0.04 MOTIF 2 a:10 t:5.9 RDS1 a:0.5 t:0.44 UGA3 a:0.1 t:0.05 RPN4 a:0.1 t:0.06 SIP4 a:0.1 t:0 MOTIF 3 a:4 t:3.05 MOTIF 1 15 a:20.99 1.4 t:16.84 1.12 ref:8 10.69 1.34 MOTIF 2 15 a:14.33 0.96 t:11.65 0.78 ref:8 10.69 1.34 MOTIF 3 15 a:17.2 1.15 t:10.19 0.68 ref:8 10.69 1.34 YGL157W YFL024C YPR127W YOL125W YNL241C YGR100W YBR015C MOTIF 1 total 3 YOL125W 3 MOTIF 1 total 2.66 YOL125W 1.93 YFL024C 0.47 YGL157W 0.13 YBR015C 0.13 MOTIF 2 total 10 YNL241C 3 YFL024C 2 YPR127W 2 YBR015C 2 YOL125W 1 MOTIF 2 total 5.9 YNL241C 2.34 YPR127W 1.58 YBR015C 0.89 YFL024C 0.34 YOL125W 0.28 YGR100W 0.24 YGL157W 0.23 MOTIF 3 total 4 YNL241C 2 YFL024C 1 YOL125W 1 MOTIF 3 total 3.05 YOL125W 1.3 YBR015C 0.7 YNL241C 0.56 YFL024C 0.49 RFX1_S9_G7 MOTIF 1 RFX1 1 2 + MOTIF 2 FKH1 0.97 -1 + FKH2 0.64 -2 - RFX1 0 1 - MOTIF 3 RFX1 0 5 - SPT23 0.98 -11 - THI2 0.41 -3 - MOTIF 1 RFX1 1 2 - MOTIF 2 FKH1 1 -1 - FKH2 0.99 -2 + MOTIF 3 SPT23 0.38 -11 + MOTIF 1 a:9 t:4.01 RFX1 a:0.89 t:0.57 MOTIF 2 a:5 t:3.04 MOTIF 3 a:6 t:3.09 MOTIF 1 15 a:17.05 1.14 t:13.86 0.92 ref:13 15.51 1.19 MOTIF 2 15 a:19.44 1.3 t:17.34 1.16 ref:13 15.51 1.19 MOTIF 3 15 a:19.04 1.27 t:12.77 0.85 ref:13 15.51 1.19 YMR177W YGR180C YIL066C YOR267C YLR286C YDL229W YDR410C MOTIF 1 total 9 YIL066C 3 YGR180C 2 YMR177W 1 YDL229W 1 YLR286C 1 YDR410C 1 MOTIF 1 total 4.01 YGR180C 1.63 YIL066C 1.05 YDL229W 0.35 YLR286C 0.34 YDR410C 0.33 YMR177W 0.31 MOTIF 2 total 5 YGR180C 2 YIL066C 1 YLR286C 1 YDR410C 1 MOTIF 2 total 3.04 YGR180C 1.37 YIL066C 0.83 YLR286C 0.42 YDR410C 0.37 YMR177W 0.05 MOTIF 3 total 6 YGR180C 3 YIL066C 2 YDL229W 1 MOTIF 3 total 3.09 YGR180C 1.22 YIL066C 0.9 YLR286C 0.8 YOR267C 0.17 RGT1_S12_G3 MOTIF 1 MET31 0.99 -10 + MET32 1 -10 + RGT1 0.76 -5 + MOTIF 2 RGT1 0 -11 - MOTIF 3 RGT1 0 -11 + MOTIF 1 DAL80 0.27 -7 - MET31 0.98 -10 - MET32 1 -10 - RGT1 0.99 -5 - SPT23 0.53 -9 - MOTIF 3 ADR1 0.55 -2 + MOTIF 2 MOTIF 1 a:11 t:8.71 RGT1 a:0.73 t:0.67 MOTIF 2 a:2 t:0 MOTIF 3 a:7 t:4.04 SUT1 a:0.29 t:0.22 MOTIF 1 15 a:17.03 1.14 t:17.06 1.14 ref:7 8.61 1.23 MOTIF 2 15 a:16.19 1.08 t:0 0 ref:7 8.61 1.23 MOTIF 3 15 a:12.56 0.84 t:8.19 0.55 ref:7 8.61 1.23 YHR094C YKR075C YER028C MOTIF 1 total 11 YKR075C 4 YER028C 4 YHR094C 3 MOTIF 1 total 8.71 YER028C 3.39 YHR094C 3.26 YKR075C 2.06 MOTIF 2 total 2 YHR094C 2 MOTIF 2 total 0 MOTIF 3 total 7 YER028C 3 YHR094C 2 YKR075C 2 MOTIF 3 total 4.04 YKR075C 1.57 YER028C 1.25 YHR094C 1.22 RLM1_S9_G9 MOTIF 1 ACE2 1 -7 + RLM1 0 -9 - MOTIF 2 MOT3 0.72 1 - RLM1 0 3 - MOTIF 3 RLM1 0 -10 + SPT23 0.57 -11 + MOTIF 1 ACE2 0.91 -10 + MOTIF 3 MOTIF 2 ACE2 0.97 -3 - MET4 0.43 8 - MOTIF 1 a:6 t:4.89 MOTIF 2 a:4 t:2.96 MOTIF 3 a:11 t:9.03 MCM1 a:0.18 t:0.14 MOTIF 1 15 a:18.44 1.23 t:17.32 1.15 ref:10 13.68 1.37 MOTIF 2 15 a:16.53 1.1 t:17.04 1.14 ref:10 13.68 1.37 MOTIF 3 15 a:15.33 1.02 t:15.17 1.01 ref:10 13.68 1.37 YLR332W YLR390W-A YKL096W YJL159W YDR077W YDR085C YIL122W YJL106W YDR524C MOTIF 1 total 6 YDR524C 6 MOTIF 1 total 4.89 YDR524C 4.77 YLR390W- 0.12 MOTIF 2 total 4 YDR524C 2 YJL106W 1 YLR390W-A 1 MOTIF 2 total 2.96 YDR524C 2.9 YLR390W- 0.06 MOTIF 3 total 11 YIL122W 4 YJL159W 2 YDR077W 2 YDR085C 1 YLR332W 1 YDR524C 1 MOTIF 3 total 9.03 YIL122W 2.34 YDR077W 2.31 YJL159W 1.89 YDR085C 1.01 YLR332W 0.72 YLR390W- 0.55 YDR524C 0.21 ROX1_S12_G11 MOTIF 1 PHO2 0.5 0 - ROX1 0 -11 + MOTIF 2 ROX1 0 -11 - MOTIF 3 ROX1 0 5 + MOTIF 1 PUT3 0.31 -6 + RDS1 0.79 4 + STB4 0.28 -11 - UME6 1 6 + MOTIF 2 MOTIF 3 MOTIF 1 a:10 t:6.65 SOK2 a:0.1 t:0 ABF1 a:0.1 t:0 PHO2 a:0.1 t:0 GCR1 a:0.1 t:0.1 MOTIF 2 a:8 t:3.99 CBF1 a:0.13 t:0 MOT3 a:0.13 t:0 MOTIF 3 a:10 t:5.37 PHD1 a:0.2 t:0.06 SOK2 a:0.1 t:0.01 MOTIF 1 15 a:12.82 0.85 t:9.92 0.66 ref:9 12.83 1.43 MOTIF 2 15 a:13.31 0.89 t:6.46 0.43 ref:9 12.83 1.43 MOTIF 3 15 a:13.94 0.93 t:11.47 0.76 ref:9 12.83 1.43 YNL036W YBR069C YLR413W YIL119C YBL029W YAL038W YOL026C YCR065W YPL230W YNL288W YLL027W MOTIF 1 total 10 YBL029W 3 YPL230W 2 YAL038W 2 YNL036W 1 YCR065W 1 YNL288W 1 MOTIF 1 total 6.65 YAL038W 1.47 YLL027W 1.43 YBR069C 1.17 YNL036W 1.01 YPL230W 0.43 YLR413W 0.41 YIL119C 0.33 YBL029W 0.22 YOL026C 0.18 MOTIF 2 total 8 YLR413W 2 YIL119C 2 YNL036W 1 YBL029W 1 YPL230W 1 YAL038W 1 MOTIF 2 total 3.99 YIL119C 1.37 YNL036W 0.78 YOL026C 0.51 YAL038W 0.44 YBL029W 0.25 YLL027W 0.22 YBR069C 0.19 YPL230W 0.15 YLR413W 0.08 MOTIF 3 total 10 YIL119C 4 YBL029W 3 YPL230W 2 YOL026C 1 MOTIF 3 total 5.37 YBL029W 1.56 YIL119C 0.92 YNL036W 0.74 YLL027W 0.64 YAL038W 0.49 YPL230W 0.41 YNL288W 0.31 YCR065W 0.15 YLR413W 0.15 RTG3_S5_G5 MOTIF 1 FKH1 0.99 -11 - FKH2 0.99 8 + RTG3 0 -8 + MOTIF 2 RTG3 0.94 -5 + MOTIF 3 RTG3 0.21 0 + SUM1 0.28 -9 - MOTIF 2 RTG3 0.9 -5 - MOTIF 1 FKH1 0.98 -11 + FKH2 0.98 8 - MOTIF 3 RTG3 0.77 0 + MOTIF 1 a:3 t:2.64 GCN4 a:0.33 t:0.31 MOTIF 2 a:3 t:2.21 HAP4 a:0.33 t:0.41 RTG3 a:0.33 t:0.53 MOT3 a:0.33 t:0 MOTIF 3 a:5 t:1.14 GCN4 a:0.2 t:0 RTG3 a:0.2 t:0.54 MOTIF 1 15 a:19.54 1.3 t:19.08 1.27 ref:6 10.32 1.72 MOTIF 2 15 a:19 1.27 t:15.23 1.02 ref:6 10.32 1.72 MOTIF 3 15 a:17.2 1.15 t:15.02 1 ref:6 10.32 1.72 YER129W YJL088W YNL036W YLL018C YDL066W MOTIF 1 total 3 YDL066W 2 YJL088W 1 MOTIF 1 total 2.64 YDL066W 1.65 YJL088W 0.74 YLL018C 0.25 MOTIF 2 total 3 YDL066W 2 YNL036W 1 MOTIF 2 total 2.21 YDL066W 1.79 YNL036W 0.3 YLL018C 0.12 MOTIF 3 total 5 YNL036W 3 YLL018C 1 YDL066W 1 MOTIF 3 total 1.14 YDL066W 0.6 YNL036W 0.42 YLL018C 0.12 SFP1_S24_G15 MOTIF 1 SFP1 0 6 - SPT23 0.32 -11 - MOTIF 2 FHL1 1 0 + RAP1 1 -1 + SFP1 1 -5 - MOTIF 3 SFP1 0 -11 - MOTIF 2 FHL1 1 0 - RAP1 1 -1 - SFP1 1 -5 + MOTIF 3 MOTIF 1 MOTIF 1 a:10 t:0 MOTIF 2 a:30 t:22.68 SFP1 a:0.77 t:0.74 FHL1 a:0.63 t:0.62 RAP1 a:0.43 t:0.46 MOTIF 3 a:7 t:7.64 MOTIF 1 15 a:16.73 1.12 t:0 0 ref:10 8.3 0.83 MOTIF 2 15 a:14.97 1 t:14.81 0.99 ref:10 8.3 0.83 MOTIF 3 15 a:14.37 0.96 t:8.3 0.55 ref:10 8.3 0.83 YIL133C YNL069C YDR064W YML025C YGL136C YOR312C YGL104C YPL090C YBL087C YML026C YJR123W YBR188C YOR234C YBR048W YOL121C MOTIF 1 total 10 YGL104C 3 YNL069C 2 YJR123W 2 YOR312C 1 YDR064W 1 YBR188C 1 MOTIF 1 total 0 MOTIF 2 total 30 YNL069C 3 YBL087C 3 YPL090C 3 YBR188C 3 YIL133C 2 YDR064W 2 YGL136C 2 YGL104C 2 YML026C 2 YBR048W 2 YOL121C 2 YML025C 1 YOR312C 1 YJR123W 1 YOR234C 1 MOTIF 2 total 22.68 YBL087C 2.7 YNL069C 2.27 YPL090C 2 YGL136C 1.82 YOL121C 1.82 YML026C 1.8 YGL104C 1.75 YBR048W 1.68 YBR188C 1.63 YIL133C 1.43 YOR312C 0.99 YOR234C 0.96 YML025C 0.92 YDR064W 0.91 MOTIF 3 total 7 YGL104C 2 YML026C 2 YGL136C 1 YOR312C 1 YBR048W 1 MOTIF 3 total 7.64 YBR188C 1.26 YJR123W 1.22 YML026C 0.94 YGL104C 0.86 YIL133C 0.66 YPL090C 0.56 YDR064W 0.51 YOL121C 0.51 YBL087C 0.36 YML025C 0.33 YOR312C 0.27 YNL069C 0.16 SIP4_S6_G3 MOTIF 1 DAL80 0.36 -2 - FHL1 1 5 - PDR3 0.26 -11 + RAP1 0.72 4 - RGT1 0.99 0 - SIP4 1 0 - UME1 0.58 -7 - YDR026c 0.96 6 - MOTIF 2 ADR1 0.27 -11 + RDS1 0.98 -2 + SIP4 1 -3 + MOTIF 3 RGT1 0.99 -6 - SIP4 0.13 -7 + YDR026c 0.97 0 - MOTIF 1 RDS1 0.99 1 + RGT1 0.86 0 + SIP4 1 0 + YDR026c 0.98 6 + MOTIF 2 ADR1 0.4 -11 + RGT1 0.98 -3 + SIP4 1 -3 + MOTIF 3 MOTIF 1 a:3 t:1.82 SIP4 a:0.67 t:1 MOTIF 2 a:2 t:5.14 SIP4 a:1 t:0.68 RDS1 a:0.5 t:0.18 SKN7 a:0.5 t:0.18 MOTIF 3 a:2 t:0 MOTIF 1 15 a:22.37 1.49 t:20.31 1.35 ref:13 13.75 1.06 MOTIF 2 15 a:23.02 1.53 t:18.61 1.24 ref:13 13.75 1.06 MOTIF 3 15 a:19.48 1.3 t:0 0 ref:13 13.75 1.06 YER065C YOL125W MOTIF 1 total 3 YER065C 2 YOL125W 1 MOTIF 1 total 1.82 YOL125W 1.82 MOTIF 2 total 2 YOL125W 2 MOTIF 2 total 5.14 YOL125W 2.59 YER065C 2.55 MOTIF 3 total 2 YER065C 2 MOTIF 3 total 0 SKO1_S7_G6 MOTIF 1 CBF1 1 0 - INO2 0.57 -1 - INO4 1 -8 + PHO4 0.86 -8 + RTG3 0.87 2 - SKO1 0.01 -9 + TYE7 0.98 -7 + MOTIF 2 SKO1 0 -11 + MOTIF 3 SKO1 1 -7 + TEC1 1 3 - MOTIF 2 MOTIF 3 MOTIF 1 MOTIF 1 a:3 t:0 CBF1 a:0.33 t:0 INO4 a:0.33 t:0 MOTIF 2 a:7 t:4.86 RAP1 a:0.29 t:0.13 MOTIF 3 a:4 t:4.13 SKO1 a:0.5 t:0.22 MOTIF 1 15 a:19.92 1.33 t:0 0 ref:6 10.34 1.72 MOTIF 2 15 a:15.86 1.06 t:14.09 0.94 ref:6 10.34 1.72 MOTIF 3 15 a:18.59 1.24 t:7.81 0.52 ref:6 10.34 1.72 YOR316C YKL096W YHR096C YHR033W YDR077W YPR013C MOTIF 1 total 3 YPR013C 2 YHR033W 1 MOTIF 1 total 0 MOTIF 2 total 7 YHR096C 2 YHR033W 2 YPR013C 2 YKL096W 1 MOTIF 2 total 4.86 YHR033W 1.8 YPR013C 0.95 YDR077W 0.79 YKL096W 0.7 YHR096C 0.62 MOTIF 3 total 4 YPR013C 3 YHR033W 1 MOTIF 3 total 4.13 YPR013C 1.35 YHR033W 1.14 YDR077W 0.98 YKL096W 0.6 YHR096C 0.06 SNT2_S15_G14 MOTIF 1 SNT2 1 -2 - MOTIF 2 ROX1 0.27 2 - SNT2 0 7 + YAP6 0.67 -2 + YOX1 0.87 -9 + MOTIF 3 SNT2 0 5 + MOTIF 1 SNT2 1 -2 + MOTIF 2 MOTIF 3 MOTIF 1 a:15 t:14.44 SNT2 a:0.93 t:0.88 MOTIF 2 a:7 t:3.82 FKH1 a:0.14 t:0.05 FKH2 a:0.14 t:0.05 MOTIF 3 a:9 t:3.77 ABF1 a:0.11 t:0 MOTIF 1 15 a:19.34 1.29 t:18.26 1.22 ref:11 11.63 1.06 MOTIF 2 15 a:14.37 0.96 t:8.22 0.55 ref:11 11.63 1.06 MOTIF 3 15 a:13.83 0.92 t:7.6 0.51 ref:11 11.63 1.06 YPR184W YBR143C YPR104C YNL181W YHR138C YPR120C YLR176C YIL160C YBR139W YCR091W YPR158W YBL075C YAL038W YJL093C MOTIF 1 total 15 YIL160C 2 YPR184W 1 YBR143C 1 YHR138C 1 YNL181W 1 YPR104C 1 YPR120C 1 YLR176C 1 YBR139W 1 YCR091W 1 YPR158W 1 YBL075C 1 YAL038W 1 YJL093C 1 MOTIF 1 total 14.44 YPR120C 2.5 YIL160C 1.82 YAL038W 1.02 YPR184W 0.91 YBR143C 0.91 YHR138C 0.91 YNL181W 0.91 YLR176C 0.91 YBR139W 0.91 YCR091W 0.91 YBL075C 0.91 YPR158W 0.91 YJL093C 0.91 MOTIF 2 total 7 YPR158W 2 YAL038W 2 YHR138C 1 YBR139W 1 YCR091W 1 MOTIF 2 total 3.82 YAL038W 1.13 YHR138C 0.75 YJL093C 0.49 YBR139W 0.48 YPR104C 0.43 YLR176C 0.19 YPR120C 0.17 YPR184W 0.09 YPR158W 0.09 MOTIF 3 total 9 YPR120C 2 YJL093C 2 YBR143C 1 YPR104C 1 YBR139W 1 YBL075C 1 YAL038W 1 MOTIF 3 total 3.77 YPR120C 0.82 YPR104C 0.39 YLR176C 0.39 YBR143C 0.35 YIL160C 0.35 YJL093C 0.35 YHR138C 0.28 YPR184W 0.25 YPR158W 0.23 YAL038W 0.08 YNL181W 0.07 YBR139W 0.07 YCR091W 0.07 YBL075C 0.07 SPT2_S7_G7 MOTIF 1 DAL80 0.86 1 - SPT2 0.02 -8 + STB5 0.26 4 + MOTIF 2 ACE2 0.99 -10 - SPT2 0 4 - MOTIF 3 SPT2 0 4 + MOTIF 1 DAL80 0.77 1 - STB5 0.39 4 + MOTIF 3 STB5 0.58 5 + MOTIF 2 MOTIF 1 a:4 t:4.56 SPT2 a:0.25 t:0.11 MOTIF 2 a:6 t:0 MOTIF 3 a:6 t:5.53 MOTIF 1 15 a:23.67 1.58 t:17.57 1.17 ref:11 11.85 1.08 MOTIF 2 15 a:17.16 1.14 t:0 0 ref:11 11.85 1.08 MOTIF 3 15 a:19.65 1.31 t:11.31 0.75 ref:11 11.85 1.08 YOL086W-A YHR175W YBR159W YJL148W YAL037W YDR524C MOTIF 1 total 4 YHR175W 3 YAL037W 1 MOTIF 1 total 4.56 YHR175W 2.38 YAL037W 1.46 YJL148W 0.72 MOTIF 2 total 6 YDR524C 6 MOTIF 2 total 0 MOTIF 3 total 6 YDR524C 3 YAL037W 2 YBR159W 1 MOTIF 3 total 5.53 YAL037W 2 YJL148W 1.08 YDR524C 0.94 YHR175W 0.77 YOL086W- 0.47 YBR159W 0.27 SPT23_S15_G12 MOTIF 1 SPT23 0 3 + MOTIF 2 SPT23 0 4 - MOTIF 3 DAL80 0.89 1 + SPT23 0 -11 + YHP1 0.44 -4 - MOTIF 3 ABF1 0.48 6 + MOTIF 2 MOTIF 1 MOTIF 1 a:8 t:4.18 MOTIF 2 a:7 t:2.46 MOTIF 3 a:1 t:3.51 MOTIF 1 15 a:13.22 0.88 t:7.19 0.48 ref:8 9.69 1.21 MOTIF 2 15 a:13.52 0.9 t:11.72 0.78 ref:8 9.69 1.21 MOTIF 3 15 a:17.3 1.15 t:9 0.6 ref:8 9.69 1.21 YLR023C YMR118C YFR002W YNL001W YOR148C YCL054W YGL001C YJR051W YLR047C YMR258C YJR011C MOTIF 1 total 8 YJR011C 3 YOR148C 1 YLR023C 1 YMR118C 1 YMR258C 1 YFR002W 1 MOTIF 1 total 4.18 YLR047C 1.43 YJR011C 0.7 YGL001C 0.55 YCL054W 0.45 YOR148C 0.4 YJR051W 0.32 YMR118C 0.24 YLR023C 0.09 MOTIF 2 total 7 YLR023C 4 YGL001C 1 YCL054W 1 YLR047C 1 MOTIF 2 total 2.46 YLR047C 0.98 YJR011C 0.76 YCL054W 0.31 YMR118C 0.18 YLR023C 0.12 YOR148C 0.11 MOTIF 3 total 1 YMR118C 1 MOTIF 3 total 3.51 YCL054W 1.54 YGL001C 0.87 YLR047C 0.47 YJR011C 0.39 YOR148C 0.17 YMR118C 0.07 STB1_S23_G12 MOTIF 1 STB1 0.63 1 + SWI4 1 0 + MOTIF 2 PDR1 0.4 3 + STB1 0 -11 + MOTIF 3 STB1 0 -1 - MOTIF 1 STB1 0.99 1 - SWI4 1 0 - MOTIF 2 MOTIF 3 STB1 0.25 -1 + MOTIF 1 a:20 t:16.64 SWI6 a:0.5 t:0.43 SWI4 a:0.5 t:0.45 STB1 a:0.45 t:0.44 STE12 a:0.05 t:0.05 PHD1 a:0.05 t:0.05 MBP1 a:0.05 t:0.1 MOTIF 2 a:14 t:12.96 MCM1 a:0.14 t:0 SWI4 a:0.07 t:0.21 NDD1 a:0.07 t:0 MBP1 a:0.07 t:0.06 MOTIF 3 a:16 t:11.9 STB1 a:0.38 t:0.2 SWI6 a:0.38 t:0.19 SWI4 a:0.38 t:0.19 MBP1 a:0.19 t:0.12 MOTIF 1 15 a:13.4 0.89 t:13.36 0.89 ref:10 8.17 0.82 MOTIF 2 15 a:13.62 0.91 t:6 0.4 ref:10 8.17 0.82 MOTIF 3 15 a:15.38 1.03 t:11.2 0.75 ref:10 8.17 0.82 YOL007C YGR221C YCR065W YNL289W YGR109C YKL096W-A YHR061C YPL256C YDR524C YOR372C YMR307W YOR246C MOTIF 1 total 20 YNL289W 5 YOL007C 3 YPL256C 3 YKL096W-A 2 YOR246C 2 YGR221C 1 YHR061C 1 YOR372C 1 YDR524C 1 YMR307W 1 MOTIF 1 total 16.64 YNL289W 3.49 YPL256C 2.7 YOR246C 2.39 YKL096W- 1.82 YOL007C 1.64 YDR524C 1.25 YMR307W 1.08 YGR221C 0.9 YOR372C 0.76 YHR061C 0.42 YGR109C 0.13 YCR065W 0.06 MOTIF 2 total 14 YNL289W 4 YPL256C 4 YKL096W-A 3 YHR061C 1 YMR307W 1 YOR246C 1 MOTIF 2 total 12.96 YPL256C 2.31 YNL289W 1.63 YKL096W- 1.62 YDR524C 1.53 YOR246C 1.34 YMR307W 1.25 YGR221C 0.81 YOR372C 0.7 YOL007C 0.6 YCR065W 0.49 YHR061C 0.44 YGR109C 0.24 MOTIF 3 total 16 YMR307W 3 YGR221C 2 YCR065W 2 YDR524C 2 YOL007C 1 YGR109C 1 YKL096W-A 1 YHR061C 1 YPL256C 1 YOR372C 1 YOR246C 1 MOTIF 3 total 11.9 YDR524C 1.93 YGR221C 1.36 YOR246C 1.12 YCR065W 1.1 YNL289W 1.09 YMR307W 0.99 YPL256C 0.92 YKL096W- 0.89 YHR061C 0.86 YOL007C 0.62 YOR372C 0.58 YGR109C 0.44 STB4_S6_G5 MOTIF 1 STB4 1 -6 - MOTIF 2 GCR1 0.98 -9 + STB4 0 -11 - MOTIF 3 MAC1 0.37 -8 + STB4 0.2 -5 - MOTIF 1 STB4 1 -6 + MOTIF 2 GCR1 0.78 -9 + MOTIF 3 STB4 1 -5 + MOTIF 1 a:6 t:5.1 STB4 a:0.67 t:0.96 MOTIF 2 a:3 t:2.02 MOTIF 3 a:2 t:4.23 STB4 a:0.5 t:0.77 MOTIF 1 15 a:17.04 1.14 t:15.8 1.05 ref:9 10.73 1.19 MOTIF 2 15 a:19.93 1.33 t:18.92 1.26 ref:9 10.73 1.19 MOTIF 3 15 a:18.68 1.25 t:12.67 0.84 ref:9 10.73 1.19 YBR046C YBR222C YPR129W YIL166C YEL020C MOTIF 1 total 6 YIL166C 3 YBR222C 1 YPR129W 1 YEL020C 1 MOTIF 1 total 5.1 YPR129W 1.78 YIL166C 1.08 YBR222C 0.91 YEL020C 0.91 YBR046C 0.42 MOTIF 2 total 3 YIL166C 2 YBR222C 1 MOTIF 2 total 2.02 YIL166C 1.82 YBR222C 0.1 YPR129W 0.1 MOTIF 3 total 2 YBR046C 1 YPR129W 1 MOTIF 3 total 4.23 YPR129W 1.27 YIL166C 1 YBR222C 0.9 YEL020C 0.62 YBR046C 0.44 STB5_S15_G12 MOTIF 1 STB5 1 0 - YDR026c 0.92 6 - MOTIF 2 RTG3 0.45 2 + STB5 0 5 + MOTIF 3 STB5 0 -11 - MOTIF 1 STB5 1 0 + YDR026c 0.63 6 + MOTIF 2 PDR1 0.28 2 + MOTIF 3 STB5 0.97 -7 + MOTIF 1 a:19 t:14.25 STB5 a:0.74 t:0.78 MOTIF 2 a:8 t:3.18 MOTIF 3 a:4 t:1.21 MOTIF 1 15 a:13.63 0.91 t:10.85 0.72 ref:10 10.73 1.07 MOTIF 2 15 a:15.98 1.07 t:15.53 1.04 ref:10 10.73 1.07 MOTIF 3 15 a:16.44 1.1 t:8.8 0.59 ref:10 10.73 1.07 YHR163W YDR248C YMR315W YIL160C YDR231C YPL061W YLR354C YEL041W YNL274C YHR183W YDL049C YHR178W MOTIF 1 total 19 YEL041W 3 YHR183W 3 YMR315W 2 YNL274C 2 YDL049C 2 YHR163W 1 YDR248C 1 YIL160C 1 YDR231C 1 YPL061W 1 YLR354C 1 YHR178W 1 MOTIF 1 total 14.25 YEL041W 2.63 YHR183W 2.59 YMR315W 1.67 YDL049C 1.24 YNL274C 1.13 YHR163W 0.91 YDR231C 0.91 YLR354C 0.91 YHR178W 0.91 YPL061W 0.9 YDR248C 0.25 YIL160C 0.2 MOTIF 2 total 8 YLR354C 3 YDR231C 2 YDR248C 1 YMR315W 1 YHR178W 1 MOTIF 2 total 3.18 YPL061W 0.91 YLR354C 0.91 YMR315W 0.7 YHR183W 0.37 YEL041W 0.29 MOTIF 3 total 4 YPL061W 2 YLR354C 1 YDL049C 1 MOTIF 3 total 1.21 YPL061W 0.3 YEL041W 0.15 YHR183W 0.15 YMR315W 0.13 YDR248C 0.08 YDR231C 0.08 YLR354C 0.08 YNL274C 0.08 YHR178W 0.08 YDL049C 0.08 SUT1_S24_G16 MOTIF 1 SUT1 0 6 + MOTIF 2 SUT1 0 3 + MOTIF 3 RGT1 1 -11 - SUT1 0 5 - MOTIF 1 ZAP1 0.74 1 + MOTIF 2 MOTIF 3 MOTIF 1 a:8 t:7.46 HAP1 a:0.13 t:0 MOTIF 2 a:17 t:15.28 SUT1 a:0.41 t:0.32 PHD1 a:0.24 t:0.19 SWI6 a:0.06 t:0.04 SOK2 a:0.06 t:0.03 SKN7 a:0.06 t:0.09 RGT1 a:0.06 t:0 MOTIF 3 a:19 t:13.54 SKN7 a:0.11 t:0.1 SUT1 a:0.11 t:0.17 UME6 a:0.05 t:0.02 RGT1 a:0.05 t:0.02 MOTIF 1 15 a:14.59 0.97 t:9.35 0.62 ref:10 6.94 0.69 MOTIF 2 15 a:12.21 0.81 t:9.91 0.66 ref:10 6.94 0.69 MOTIF 3 15 a:10.66 0.71 t:6.3 0.42 ref:10 6.94 0.69 YDL214C YKL110C YKR075C YGL055W YIL119C YNL178W YMR135C YBL029W YBR069C YGR249W YPR149W YGR067C YKL063C YPL177C YPR006C YOR178C MOTIF 1 total 8 YGL055W 2 YGR249W 2 YIL119C 2 YPR149W 1 YKL063C 1 MOTIF 1 total 7.46 YBL029W 1.29 YIL119C 1.21 YKL063C 1.01 YMR135C 0.88 YGL055W 0.75 YGR249W 0.65 YDL214C 0.43 YBR069C 0.4 YNL178W 0.38 YKR075C 0.34 YPR006C 0.12 MOTIF 2 total 17 YKR075C 4 YKL110C 2 YGR249W 2 YGL055W 1 YIL119C 1 YMR135C 1 YBR069C 1 YBL029W 1 YPR149W 1 YGR067C 1 YKL063C 1 YPL177C 1 MOTIF 2 total 15.28 YGR249W 3.28 YKR075C 2.93 YPR149W 1.71 YGR067C 1.45 YPL177C 1.08 YIL119C 0.95 YGL055W 0.94 YKL110C 0.79 YMR135C 0.64 YBR069C 0.55 YBL029W 0.41 YOR178C 0.25 YKL063C 0.2 YNL178W 0.05 YPR006C 0.05 MOTIF 3 total 19 YGL055W 4 YGR067C 3 YGR249W 2 YPR149W 2 YPL177C 2 YDL214C 1 YKR075C 1 YMR135C 1 YBR069C 1 YBL029W 1 YPR006C 1 MOTIF 3 total 13.54 YGR249W 2.34 YGL055W 2.03 YGR067C 1.62 YPR149W 1.46 YPL177C 1.08 YMR135C 1.03 YKR075C 0.99 YBL029W 0.87 YBR069C 0.53 YIL119C 0.52 YPR006C 0.44 YKL063C 0.28 YKL110C 0.23 YNL178W 0.12 THI2_S6_G6 MOTIF 1 MAC1 0.52 -11 - MOT3 0.71 2 - NDD1 0.33 -10 + RFX1 0.96 7 - THI2 1 -1 - MOTIF 2 SPT2 0.26 7 - THI2 0 7 - MOTIF 3 ABF1 0.95 -10 + RTG3 0.31 -6 + THI2 0 8 - MOTIF 1 MAC1 0.43 -11 + MOT3 0.65 2 + NDD1 0.56 -10 - RFX1 0.94 7 + THI2 1 -1 + MOTIF 2 MOTIF 3 MOTIF 1 a:6 t:5.17 THI2 a:1 t:1 MOTIF 2 a:7 t:3.9 MOTIF 3 a:2 t:0 MOTIF 1 15 a:21.41 1.43 t:21.64 1.44 ref:12 10.77 0.9 MOTIF 2 15 a:17.42 1.16 t:12.47 0.83 ref:12 10.77 0.9 MOTIF 3 15 a:18.78 1.25 t:0 0 ref:12 10.77 0.9 YLR004C YOL055C YDL080C YPL214C YDR438W YBR092C MOTIF 1 total 6 YLR004C 1 YOL055C 1 YDL080C 1 YDR438W 1 YPL214C 1 YBR092C 1 MOTIF 1 total 5.17 YLR004C 0.91 YOL055C 0.91 YDL080C 0.91 YPL214C 0.91 YBR092C 0.91 YDR438W 0.62 MOTIF 2 total 7 YDL080C 2 YDR438W 2 YLR004C 1 YPL214C 1 YBR092C 1 MOTIF 2 total 3.9 YDL080C 1.16 YBR092C 0.81 YDR438W 0.6 YOL055C 0.52 YLR004C 0.51 YPL214C 0.3 MOTIF 3 total 2 YOL055C 1 YDL080C 1 MOTIF 3 total 0 YAP1_S13_G12 MOTIF 1 ARR1 0.42 -5 - CAD1 1 -2 + YAP1 1 -3 + YAP3 0.42 -5 - YAP5 0.42 -5 - YAP6 1 -5 - MOTIF 2 YAP1 0.01 5 - MOTIF 3 YAP1 0 5 + MOTIF 1 ARR1 0.37 -5 + CAD1 1 -2 - YAP1 1 -3 - YAP3 0.37 -5 + YAP5 0.37 -5 + YAP6 1 -5 + YAP7 0.91 -4 + MOTIF 3 MOTIF 2 MOTIF 1 a:13 t:9.27 YAP1 a:0.77 t:0.81 YAP7 a:0.69 t:0.72 CAD1 a:0.31 t:0.3 MOTIF 2 a:4 t:0 INO2 a:0.25 t:0 HAP1 a:0.25 t:0 MOTIF 3 a:6 t:0.17 MOTIF 1 15 a:15.08 1.01 t:15.17 1.01 ref:9 12.11 1.35 MOTIF 2 15 a:16.38 1.09 t:0 0 ref:9 12.11 1.35 MOTIF 3 15 a:14.36 0.96 t:13.88 0.93 ref:9 12.11 1.35 YPL202C YNL134C YKR052C YJR104C YGR209C YML028W YDR084C YBL032W YKL086W YMR038C YJL101C YLR074C MOTIF 1 total 13 YNL134C 2 YGR209C 2 YPL202C 1 YKR052C 1 YJR104C 1 YML028W 1 YDR084C 1 YKL086W 1 YMR038C 1 YJL101C 1 YLR074C 1 MOTIF 1 total 9.27 YGR209C 1.43 YNL134C 1.36 YKR052C 1.02 YJL101C 0.89 YMR038C 0.86 YJR104C 0.85 YLR074C 0.84 YPL202C 0.78 YML028W 0.69 YDR084C 0.36 YKL086W 0.19 MOTIF 2 total 4 YJR104C 3 YKL086W 1 MOTIF 2 total 0 MOTIF 3 total 6 YNL134C 1 YPL202C 1 YKR052C 1 YJR104C 1 YBL032W 1 YJL101C 1 MOTIF 3 total 0.17 YJR104C 0.11 YBL032W 0.06 YAP6_S3_G3 MOTIF 1 GCR1 0.38 -10 + YAP6 0 3 + MOTIF 2 DAL80 0.34 -3 - SPT23 0.66 -11 - YAP6 0 1 - MOTIF 3 MAC1 0.35 1 - YAP6 0.01 -5 + MOTIF 3 MAC1 0.86 1 + MCM1 0.34 -9 - MOTIF 1 MOTIF 2 FKH1 0.36 4 - MBP1 0.61 -6 + STB1 0.34 -5 + SWI4 0.27 -6 + SWI6 0.59 0 - MOTIF 1 a:4 t:2.5 UME6 a:0.25 t:0.25 MOTIF 2 a:2 t:0.8 MOTIF 3 a:2 t:2.25 MOTIF 1 15 a:18.64 1.24 t:18.62 1.24 ref:7 12.04 1.72 MOTIF 2 15 a:21.56 1.44 t:18.18 1.21 ref:7 12.04 1.72 MOTIF 3 15 a:22.1 1.47 t:14.84 0.99 ref:7 12.04 1.72 YCR021C YLR297W YGR234W MOTIF 1 total 4 YLR297W 4 MOTIF 1 total 2.5 YLR297W 2.5 MOTIF 2 total 2 YLR297W 1 YGR234W 1 MOTIF 2 total 0.8 YGR234W 0.41 YLR297W 0.39 MOTIF 3 total 2 YCR021C 2 MOTIF 3 total 2.25 YCR021C 2.25 YDR026c_S10_G10 MOTIF 1 FKH1 0.99 3 - GAL4 0.77 8 + GAL80 0.76 8 + PUT3 0.94 9 + REB1 1 -7 + YDR026c 1 0 - MOTIF 2 YDR026c 0 4 + MOTIF 3 YDR026c 0 5 - MOTIF 2 MOTIF 1 FKH1 0.82 3 - GAL4 0.75 8 + PUT3 0.31 9 + REB1 1 -7 + SIP4 0.31 -7 + YDR026c 1 0 - MOTIF 3 MOTIF 1 a:8 t:1.79 YDR026c a:1 t:0.87 REB1 a:0.25 t:0.21 MOTIF 2 a:7 t:6.17 MOTIF 3 a:5 t:0 MOTIF 1 15 a:18.43 1.23 t:12.87 0.86 ref:10 15.86 1.59 MOTIF 2 15 a:13.75 0.92 t:13.89 0.93 ref:10 15.86 1.59 MOTIF 3 15 a:16.76 1.12 t:0 0 ref:10 15.86 1.59 YEL055C YLR459W YFL005W YNR012W YIL002W-A YBR035C YDL085C-A YGR094W YBR179C MOTIF 1 total 8 YEL055C 1 YLR459W 1 YNR012W 1 YIL002W-A 1 YDL085C-A 1 YGR094W 1 YBR035C 1 YBR179C 1 MOTIF 1 total 1.79 YDL085C- 0.39 YBR035C 0.26 YIL002W- 0.21 YLR459W 0.21 YNR012W 0.2 YEL055C 0.19 YBR179C 0.17 YGR094W 0.16 MOTIF 2 total 7 YDL085C-A 5 YNR012W 1 YBR179C 1 MOTIF 2 total 6.17 YDL085C- 2.93 YBR035C 1.28 YNR012W 0.91 YIL002W- 0.55 YBR179C 0.29 YEL055C 0.21 MOTIF 3 total 5 YBR035C 3 YEL055C 1 YGR094W 1 MOTIF 3 total 0 YOX1_S3_G3 MOTIF 1 SIP4 0.3 8 - YOX1 0 -4 - MOTIF 2 YOX1 0.01 8 + MOTIF 3 FKH1 0.92 3 - MCM1 0.27 -1 - NDD1 1 -1 - TEC1 0.48 -11 - YOX1 0 -11 + MOTIF 2 HSF1 0.4 6 - SPT23 0.36 -9 + MOTIF 1 MOTIF 3 MOTIF 1 a:2 t:1.85 MOTIF 2 a:2 t:2.1 MOTIF 3 a:3 t:0.13 MCM1 a:0.33 t:0.62 NDD1 a:0.33 t:0.62 MOTIF 1 15 a:20.27 1.35 t:17.1 1.14 ref:12 16.27 1.36 MOTIF 2 15 a:20.42 1.36 t:18.52 1.23 ref:12 16.27 1.36 MOTIF 3 15 a:19.46 1.3 t:19.5 1.3 ref:12 16.27 1.36 YLR047C YHR151C YGR218W MOTIF 1 total 2 YLR047C 2 MOTIF 1 total 1.85 YLR047C 1.85 MOTIF 2 total 2 YLR047C 2 MOTIF 2 total 2.1 YLR047C 1.85 YGR218W 0.25 MOTIF 3 total 3 YHR151C 2 YLR047C 1 MOTIF 3 total 0.13 YHR151C 0.13 ########### COMPARISON WITH MOTIF WIDTH MATCHING WIDTH IN HARBISON ET AL. #####################3 ACE2_S12_G7 MOTIF 1 ACE2 1 1 - SWI5 1 1 - MOTIF 2 ACE2 0 3 - ROX1 0.91 5 - MOTIF 3 ACE2 0 3 - MOTIF 1 ACE2 1 1 + SWI5 1 1 + MOTIF 3 FKH1 0.69 4 + FKH2 0.93 1 - STB5 0.42 5 + MOTIF 2 MOTIF 1 a:13 t:8.64 SWI5 a:0.46 t:0.53 ACE2 a:0.46 t:0.6 MOTIF 2 a:10 t:0 MOTIF 3 a:7 t:1.25 SWI6 a:0.14 t:0 MBP1 a:0.14 t:0 MOTIF 1 7 a:10.52 1.5 t:10.78 1.54 ref:7 10.78 1.54 MOTIF 2 7 a:9.2 1.31 t:0 0 ref:7 10.78 1.54 MOTIF 3 7 a:9.8 1.4 t:6.83 0.98 ref:7 10.78 1.54 YNL079C YLR286C YGR041W YER124C YNL328C YDL127W YBR157C MOTIF 1 total 13 YNL328C 4 YER124C 3 YDL127W 3 YGR041W 2 YNL079C 1 MOTIF 1 total 8.64 YNL328C 3.22 YER124C 2.72 YNL079C 0.91 YGR041W 0.87 YDL127W 0.61 YLR286C 0.22 YBR157C 0.09 MOTIF 2 total 10 YLR286C 2 YGR041W 2 YER124C 2 YNL328C 2 YDL127W 1 YBR157C 1 MOTIF 2 total 0 MOTIF 3 total 7 YER124C 2 YNL328C 2 YNL079C 1 YLR286C 1 YGR041W 1 MOTIF 3 total 1.25 YER124C 0.47 YLR286C 0.36 YGR041W 0.21 YNL328C 0.14 YBR157C 0.07 ADR1_S13_G10 MOTIF 1 ADR1 0.92 -2 - HAP2 0.96 -1 + HAP3 0.99 -1 + HAP5 0.96 -1 + MOTIF 2 ADR1 0 -2 - MOTIF 3 ADR1 0 0 - HSF1 0.97 -2 + SPT23 0.98 -1 - MOTIF 1 ADR1 0.92 -2 - MOTIF 2 HAP4 0.65 3 + MOTIF 3 MOTIF 1 a:9 t:6.21 ADR1 a:0.11 t:0.03 HAP4 a:0.11 t:0.06 MOTIF 2 a:14 t:3.63 ABF1 a:0.07 t:0 GCN4 a:0.07 t:0 MOTIF 3 a:6 t:0 MOTIF 1 6 a:8.67 1.45 t:4.41 0.74 ref:6 6.83 1.14 MOTIF 2 6 a:8.13 1.35 t:4.83 0.81 ref:6 6.83 1.14 MOTIF 3 6 a:9.5 1.58 t:0 0 ref:6 6.83 1.14 YJR141W YDL119C YAL022C YNR006W YKL016C YPL148C YER133W YPR109W YNL100W YIL146C MOTIF 1 total 9 YKL016C 2 YJR141W 1 YDL119C 1 YNR006W 1 YER133W 1 YPL148C 1 YIL146C 1 YNL100W 1 MOTIF 1 total 6.21 YKL016C 1.63 YNL100W 1.24 YIL146C 1.04 YPL148C 0.55 YNR006W 0.52 YDL119C 0.46 YJR141W 0.38 YER133W 0.33 YAL022C 0.06 MOTIF 2 total 14 YKL016C 5 YAL022C 2 YIL146C 2 YDL119C 1 YNR006W 1 YER133W 1 YPL148C 1 YPR109W 1 MOTIF 2 total 3.63 YKL016C 0.96 YNL100W 0.74 YIL146C 0.73 YDL119C 0.53 YJR141W 0.24 YNR006W 0.18 YPL148C 0.18 YER133W 0.07 MOTIF 3 total 6 YDL119C 2 YNR006W 2 YAL022C 1 YIL146C 1 MOTIF 3 total 0 CAD1_S9_G9 MOTIF 1 ARR1 0.52 -2 - CAD1 1 0 + YAP1 1 -1 + YAP3 0.52 -2 - YAP5 0.52 -2 - YAP6 1 -2 - YAP7 1 -1 - YHP1 0.46 -6 - MOTIF 2 CAD1 0 4 - PHO2 0.69 -3 + RTG3 0.27 2 + SKO1 0.92 -4 - STB1 0.45 -2 - MOTIF 3 CAD1 0 4 - HAP2 0.81 -6 - HAP3 0.9 -6 - HAP5 0.81 -6 - MAC1 0.9 -2 + MOTIF 2 STB1 0.99 -2 - SWI4 0.91 -3 - SWI6 0.69 2 + MOTIF 3 FKH2 0.53 -6 - GAL4 0.94 -1 - GAL80 0.3 8 + PUT3 0.53 9 + SIP4 0.7 -1 - MOTIF 1 ARR1 0.46 -2 - CAD1 1 0 + RLM1 0.29 -5 - YAP1 1 -1 + YAP3 0.46 -2 - YAP5 0.46 -2 - YAP6 1 -2 - YAP7 1 -1 - YHP1 0.38 -6 - MOTIF 1 a:9 t:6.27 YAP7 a:0.89 t:0.87 CAD1 a:0.89 t:0.87 YAP1 a:0.44 t:0.45 YAP6 a:0.11 t:0.11 MOTIF 2 a:7 t:3.02 MBP1 a:0.43 t:0.3 SWI4 a:0.43 t:0.43 CBF1 a:0.14 t:0 MOTIF 3 a:6 t:4.7 HAP5 a:0.17 t:0.05 HAP2 a:0.17 t:0.05 MOTIF 1 10 a:15.66 1.57 t:15.39 1.54 ref:10 12.72 1.27 MOTIF 2 10 a:11.88 1.19 t:10.52 1.05 ref:10 12.72 1.27 MOTIF 3 10 a:11.81 1.18 t:6.92 0.69 ref:10 12.72 1.27 YKL103C YKR071C YKL086W YKL040C YJL101C YPR048W YMR038C YGR234W YKR052C MOTIF 1 total 9 YGR234W 2 YKR071C 1 YKL086W 1 YJL101C 1 YKL040C 1 YPR048W 1 YMR038C 1 YKR052C 1 MOTIF 1 total 6.27 YGR234W 1.36 YKL086W 0.76 YMR038C 0.75 YKR071C 0.68 YKL040C 0.68 YJL101C 0.68 YPR048W 0.68 YKR052C 0.68 MOTIF 2 total 7 YKL103C 3 YKL040C 1 YJL101C 1 YGR234W 1 YKR052C 1 MOTIF 2 total 3.02 YKL103C 1.3 YMR038C 0.86 YKR052C 0.5 YJL101C 0.36 MOTIF 3 total 6 YJL101C 2 YGR234W 2 YKL103C 1 YKL040C 1 MOTIF 3 total 4.7 YKL103C 1.25 YKR071C 1.15 YGR234W 0.91 YJL101C 0.84 YKL040C 0.48 YKR052C 0.07 DAL80_S9_G8 MOTIF 1 AFT2 0.98 -1 - DAL80 0 1 + FHL1 0.4 5 - NRG1 1 2 + RCS1 0.7 -1 - REB1 1 0 - YDR026c 1 3 + ZAP1 0.38 0 + MOTIF 2 DAL80 0 0 + DIG1 0.99 3 + FKH1 1 0 - FKH2 0.99 7 + ROX1 1 4 - STE12 1 3 + YOX1 0.27 -1 + MOTIF 3 DAL80 0.01 1 - MOTIF 2 DIG1 1 3 - FKH1 1 0 + FKH2 1 7 - ROX1 1 4 + STE12 1 3 - YOX1 0.26 -1 - MOTIF 3 STB5 0.93 6 + MOTIF 1 FHL1 0.97 5 - NRG1 0.74 2 + RAP1 0.92 4 - SFP1 0.87 0 + YDR026c 0.83 3 + MOTIF 1 a:9 t:6.27 REB1 a:0.11 t:0.06 MOTIF 2 a:9 t:6.26 MOTIF 3 a:8 t:5.82 MOTIF 1 5 a:8.12 1.62 t:6.95 1.39 ref:5 8.6 1.72 MOTIF 2 5 a:9.28 1.86 t:9.01 1.8 ref:5 8.6 1.72 MOTIF 3 5 a:9.11 1.82 t:7.35 1.47 ref:5 8.6 1.72 YMR257C YDR127W YHR091C YOR093C YOL042W YLR082C YDL049C YDR042C MOTIF 1 total 9 YOR093C 3 YMR257C 2 YDR042C 2 YLR082C 1 YDL049C 1 MOTIF 1 total 6.27 YDR042C 2.12 YOR093C 1.55 YDL049C 1.09 YMR257C 0.98 YLR082C 0.45 YDR127W 0.08 MOTIF 2 total 9 YDR042C 4 YOL042W 2 YMR257C 1 YLR082C 1 YDL049C 1 MOTIF 2 total 6.26 YDR042C 3 YMR257C 0.96 YOL042W 0.9 YDL049C 0.78 YLR082C 0.4 YDR127W 0.22 MOTIF 3 total 8 YDR042C 3 YDR127W 2 YOL042W 2 YMR257C 1 MOTIF 3 total 5.82 YDR042C 2.24 YDR127W 0.99 YOL042W 0.91 YMR257C 0.89 YHR091C 0.39 YOR093C 0.2 YLR082C 0.2 GAL4_S13_G9 MOTIF 1 GAL4 1 0 + GAL80 1 0 + RGT1 1 0 - YDR026c 1 6 - MOTIF 2 GAL4 0 12 + MOTIF 3 GAL4 0 11 + YAP6 0.55 -8 + MOTIF 1 GAL4 1 0 - GAL80 1 0 - PDR3 0.26 4 - RGT1 1 0 - YDR026c 0.97 6 - MOTIF 3 MOTIF 2 MOTIF 1 a:13 t:10.82 GAL4 a:0.92 t:0.93 GAL80 a:0.23 t:0.24 MOTIF 2 a:3 t:1.57 GAL4 a:0.33 t:0.43 MOTIF 3 a:12 t:3.63 MOTIF 1 17 a:15.2 0.89 t:14.19 0.83 ref:17 7.33 0.43 MOTIF 2 17 a:17.5 1.03 t:8.86 0.52 ref:17 7.33 0.43 MOTIF 3 17 a:14.57 0.86 t:7.11 0.42 ref:17 7.33 0.43 YDR009W YML051W YOR138C YGL134W YBR018C YNL073W YDR277C YOR120W YBR019C MOTIF 1 total 13 YBR019C 4 YBR018C 2 YDR009W 1 YML051W 1 YOR138C 1 YGL134W 1 YNL073W 1 YDR277C 1 YOR120W 1 MOTIF 1 total 10.82 YBR019C 3.51 YBR018C 1.82 YOR120W 1.35 YML051W 0.91 YGL134W 0.91 YNL073W 0.91 YDR277C 0.9 YOR138C 0.51 MOTIF 2 total 3 YOR138C 1 YNL073W 1 YDR277C 1 MOTIF 2 total 1.57 YDR277C 0.88 YBR019C 0.24 YOR120W 0.13 YBR018C 0.12 YOR138C 0.09 YNL073W 0.06 YML051W 0.05 MOTIF 3 total 12 YDR277C 5 YOR120W 3 YDR009W 2 YML051W 1 YGL134W 1 MOTIF 3 total 3.63 YOR138C 1.23 YBR019C 1 YDR277C 0.91 YML051W 0.27 YDR009W 0.22 GAL80_S3_G1 MOTIF 1 GAL4 1 0 + GAL80 0.88 0 - RGT1 0.99 0 - YDR026c 0.96 6 - MOTIF 2 GAL80 0 11 + MOT3 0.39 -1 - MOTIF 3 GAL80 0 11 - MOTIF 1 GAL4 1 0 - GAL80 0.89 0 - RGT1 0.99 0 - YDR026c 0.94 6 + MOTIF 3 MOTIF 2 MOTIF 1 a:4 t:3.41 GAL4 a:1 t:1 GAL80 a:0.75 t:0.8 MOTIF 2 a:1 t:0.58 MOTIF 3 a:3 t:2.15 MOTIF 1 17 a:19.25 1.13 t:19.56 1.15 ref:17 10.32 0.61 MOTIF 2 17 a:30.14 1.77 t:30.14 1.77 ref:17 10.32 0.61 MOTIF 3 17 a:19.34 1.14 t:16.42 0.97 ref:17 10.32 0.61 YBR019C MOTIF 1 total 4 YBR019C 4 MOTIF 1 total 3.41 YBR019C 3.41 MOTIF 2 total 1 YBR019C 1 MOTIF 2 total 0.58 YBR019C 0.58 MOTIF 3 total 3 YBR019C 3 MOTIF 3 total 2.15 YBR019C 2.15 GAT1_S15_G7 MOTIF 1 DAL80 1 -1 - DAL82 1 -1 - GAT1 1 0 - GLN3 1 -1 - GZF3 1 -1 - MOTIF 2 GAT1 0 -3 - MOTIF 3 GAT1 0 2 - TEC1 0.88 -3 - MOTIF 1 DAL80 1 -1 - DAL82 1 -1 - GAT1 1 0 - GLN3 1 -1 - GZF3 1 -1 - MOTIF 2 MET31 0.72 -3 - MET32 0.77 -3 - MOTIF 3 MOTIF 1 a:17 t:14.99 GAT1 a:0.71 t:0.7 DAL82 a:0.24 t:0.24 GLN3 a:0.12 t:0.12 GZF3 a:0.06 t:0.05 MOTIF 2 a:17 t:9.09 GAT1 a:0.06 t:0 DAL82 a:0.06 t:0 MOTIF 3 a:6 t:0 AZF1 a:0.17 t:0 MOTIF 1 7 a:11.05 1.58 t:10.97 1.57 ref:7 10.86 1.55 MOTIF 2 7 a:6.36 0.91 t:6.16 0.88 ref:7 10.86 1.55 MOTIF 3 7 a:11.01 1.57 t:0 0 ref:7 10.86 1.55 YDL237W YJL110C YJR011C YIR029W YEL062W YML098W YLR023C MOTIF 1 total 17 YEL062W 5 YDL237W 4 YJL110C 3 YIR029W 3 YLR023C 2 MOTIF 1 total 14.99 YEL062W 4.43 YDL237W 3.48 YJL110C 2.73 YIR029W 2.59 YLR023C 1.54 YJR011C 0.22 MOTIF 2 total 17 YJR011C 10 YIR029W 3 YJL110C 1 YEL062W 1 YML098W 1 YLR023C 1 MOTIF 2 total 9.09000000000001 YJR011C 4.74 YLR023C 1.3 YJL110C 0.97 YIR029W 0.82 YML098W 0.73 YEL062W 0.53 MOTIF 3 total 6 YEL062W 2 YLR023C 2 YDL237W 1 YJR011C 1 MOTIF 3 total 0 GCR1_S7_G4 MOTIF 1 GCR1 1 -2 + SIP4 0.27 9 - MOTIF 2 CIN5 0.61 -4 + GCR1 0 5 - MET31 0.37 -3 - MOTIF 3 GCR1 0 4 + YAP1 0.57 -4 + YAP6 0.6 2 - MOTIF 1 GCR1 1 -2 - SIP4 0.32 9 + MOTIF 2 MOTIF 3 MOTIF 1 a:10 t:7.96 GCR1 a:0.6 t:0.65 MOTIF 2 a:5 t:0.09 MOTIF 3 a:5 t:0 MOTIF 1 9 a:12.67 1.41 t:12.87 1.43 ref:9 14.6 1.62 MOTIF 2 9 a:13.11 1.46 t:17.03 1.89 ref:9 14.6 1.62 MOTIF 3 9 a:12.85 1.43 t:0 0 ref:9 14.6 1.62 YGR192C YER177W YLR044C YAL038W MOTIF 1 total 10 YER177W 4 YAL038W 3 YLR044C 2 YGR192C 1 MOTIF 1 total 7.96 YER177W 3.64 YAL038W 2.16 YLR044C 1.82 YGR192C 0.34 MOTIF 2 total 5 YLR044C 5 MOTIF 2 total 0.09 YLR044C 0.09 MOTIF 3 total 5 YLR044C 3 YER177W 1 YAL038W 1 MOTIF 3 total 0 GZF3_S3_G3 MOTIF 1 ADR1 0.76 -1 + GZF3 0 1 + MET31 0.9 5 + MET32 1 5 + MET4 0.26 5 + PHO4 0.96 3 + MOTIF 2 GZF3 0 -2 + PHD1 1 1 - SOK2 1 -1 - MOTIF 3 BAS1 1 -2 - GCN4 1 -2 - GZF3 0 2 - INO2 0.98 -2 + INO4 0.76 2 - RTG3 0.99 1 + SKO1 0.98 2 + SUM1 0.8 2 + MOTIF 1 ADR1 0.57 -1 + MET31 0.85 5 + MET32 0.99 5 + MET4 0.33 5 + PHO4 0.94 3 + MOTIF 2 PHD1 0.99 1 + SOK2 1 -1 + MOTIF 3 BAS1 0.28 -2 + MOTIF 1 a:3 t:2.49 MOTIF 2 a:3 t:2.46 SOK2 a:1 t:0.71 AZF1 a:0.33 t:0.2 MOTIF 3 a:3 t:0.59 MOTIF 1 6 a:12 2 t:10.77 1.8 ref:6 10.32 1.72 MOTIF 2 6 a:9.89 1.65 t:9.05 1.51 ref:6 10.32 1.72 MOTIF 3 6 a:11.32 1.89 t:10.8 1.8 ref:6 10.32 1.72 YLR023C YLL048C YPR171W MOTIF 1 total 3 YLR023C 3 MOTIF 1 total 2.49 YLR023C 2.49 MOTIF 2 total 3 YLR023C 3 MOTIF 2 total 2.46 YLR023C 1.74 YPR171W 0.72 MOTIF 3 total 3 YPR171W 2 YLR023C 1 MOTIF 3 total 0.59 YPR171W 0.35 YLR023C 0.24 HAP2_S21_G17 MOTIF 1 HAP2 0 -1 - PDR3 0.53 0 - RGT1 0.95 -1 + MOTIF 2 DAL80 1 1 + DAL82 1 1 + GAT1 1 2 + GLN3 1 1 + GZF3 1 1 + HAP2 0 0 - MOTIF 3 CAD1 0.31 1 - HAP2 0.18 -1 + HAP3 0.84 -1 + YAP6 0.91 2 + MOTIF 3 HAP2 1 -1 - HAP3 1 -1 - HAP4 0.94 1 - HAP5 1 -1 - MOTIF 2 DAL80 1 1 - GAT1 0.63 2 - GZF3 0.85 1 - STB5 0.73 4 + YOX1 0.26 3 - MOTIF 1 STB4 0.89 0 - MOTIF 1 a:16 t:11.98 DAL81 a:0.06 t:0.03 MOTIF 2 a:16 t:15.45 GLN3 a:0.25 t:0.26 DAL82 a:0.25 t:0.26 MOTIF 3 a:25 t:16.29 HAP2 a:0.2 t:0.77 HAP5 a:0.12 t:0.43 YAP7 a:0.04 t:0 GCN4 a:0.04 t:0 CAD1 a:0.04 t:0 HAP3 a:0.04 t:0.33 YAP6 a:0.04 t:0 HAP4 a:0.04 t:0.17 MOTIF 1 5 a:7.6 1.52 t:4.01 0.8 ref:5 8.61 1.72 MOTIF 2 5 a:9.17 1.83 t:5.79 1.16 ref:5 8.61 1.72 MOTIF 3 5 a:8.01 1.6 t:8.22 1.64 ref:5 8.61 1.72 YGR234W YPR145W YHR051W YIR030C YLL018C YLL027W YGR121C YPL207W YOL077W-A YDR377W YGR019W YGL187C YLR220W YFR033C YER174C YDR529C YDL170W MOTIF 1 total 16 YGR019W 2 YPR145W 2 YFR033C 2 YDR529C 2 YOL077W-A 1 YDR377W 1 YLR220W 1 YGL187C 1 YGR234W 1 YDL170W 1 YGR121C 1 YPL207W 1 MOTIF 1 total 11.98 YPR145W 1.3 YDL170W 1.16 YGL187C 1.09 YLR220W 1.04 YOL077W- 1.01 YGR019W 0.94 YGR234W 0.85 YFR033C 0.79 YLL027W 0.74 YGR121C 0.74 YDR377W 0.61 YDR529C 0.59 YIR030C 0.5 YPL207W 0.49 YLL018C 0.08 YER174C 0.05 MOTIF 2 total 16 YGR019W 2 YPR145W 2 YFR033C 2 YIR030C 2 YDL170W 2 YGR121C 2 YOL077W-A 1 YLR220W 1 YGR234W 1 YLL018C 1 MOTIF 2 total 15.45 YIR030C 1.84 YDL170W 1.8 YGR121C 1.63 YOL077W- 1.5 YPR145W 1.48 YGL187C 1.3 YLL027W 1.16 YGR234W 1.04 YDR529C 0.88 YLR220W 0.85 YFR033C 0.76 YGR019W 0.58 YDR377W 0.45 YHR051W 0.09 YPL207W 0.09 MOTIF 3 total 25 YDL170W 5 YPR145W 4 YLL027W 3 YGR019W 2 YLR220W 2 YGL187C 2 YGR234W 2 YOL077W-A 1 YFR033C 1 YER174C 1 YIR030C 1 YDR529C 1 MOTIF 3 total 16.29 YOL077W- 1.83 YLR220W 1.77 YGR019W 1.05 YGL187C 1.04 YER174C 1.04 YIR030C 1.04 YGR234W 0.91 YFR033C 0.91 YDR529C 0.91 YDL170W 0.91 YLL027W 0.9 YGR121C 0.9 YPR145W 0.9 YDR377W 0.89 YPL207W 0.68 YLL018C 0.61 HAP3_S13_G11 MOTIF 1 CAD1 0.99 1 + HAP3 0 -1 - YAP1 1 0 + YAP6 0.99 2 - YHP1 0.54 -1 + MOTIF 2 HAP3 0 -1 + MOTIF 3 DAL80 1 1 + DAL82 0.84 1 + GAT1 1 2 + GZF3 0.96 1 + HAP3 0 -1 + MOTIF 3 DAL80 0.7 1 - DAL82 0.36 1 - GAT1 0.96 2 - GZF3 0.89 1 - MOTIF 1 CAD1 0.81 1 + YAP6 0.7 2 - MOTIF 2 MOTIF 1 a:14 t:8.88 GCN4 a:0.07 t:0.09 MOTIF 2 a:6 t:1.51 MOTIF 3 a:10 t:8.27 GLN3 a:0.1 t:0.03 DAL82 a:0.1 t:0.08 MOTIF 1 5 a:9 1.8 t:3.99 0.8 ref:5 8.61 1.72 MOTIF 2 5 a:8.03 1.61 t:8.09 1.62 ref:5 8.61 1.72 MOTIF 3 5 a:9.08 1.82 t:7.01 1.4 ref:5 8.61 1.72 YNL009W YBR039W YLR220W YHR051W YGL187C YCR028C YPL207W YLL027W YER174C YML119W YDL170W MOTIF 1 total 14 YLL027W 5 YDL170W 4 YLR220W 2 YBR039W 1 YGL187C 1 YER174C 1 MOTIF 1 total 8.88 YDL170W 3.56 YML119W 1.97 YLR220W 0.84 YLL027W 0.79 YER174C 0.57 YGL187C 0.45 YBR039W 0.2 YPL207W 0.17 YNL009W 0.15 YHR051W 0.11 YCR028C 0.07 MOTIF 2 total 6 YBR039W 2 YLR220W 2 YGL187C 2 MOTIF 2 total 1.51 YGL187C 0.67 YBR039W 0.3 YDL170W 0.3 YLR220W 0.24 MOTIF 3 total 10 YML119W 3 YGL187C 2 YDL170W 2 YLL027W 2 YLR220W 1 MOTIF 3 total 8.27 YDL170W 4.28 YML119W 2.32 YER174C 0.58 YLR220W 0.56 YLL027W 0.26 YCR028C 0.08 YNL009W 0.07 YPL207W 0.07 YGL187C 0.05 HAP5_S21_G16 MOTIF 1 HAP5 0 -1 - PDR3 0.74 0 + RGT1 0.95 -1 - MOTIF 2 ADR1 0.26 1 - HAP5 0 -1 + MOTIF 3 CAD1 1 1 + HAP5 0 -1 - YAP1 1 0 + YAP6 0.99 2 - YHP1 0.44 -1 + MOTIF 2 SIP4 0.32 9 - MOTIF 1 ADR1 0.93 -1 - GAL4 0.51 -1 - PDR3 0.25 0 + SIP4 0.34 -1 - MOTIF 3 MOTIF 1 a:15 t:9.42 MOTIF 2 a:21 t:15.73 HAP5 a:0.05 t:0.03 MOTIF 3 a:17 t:0 YAP6 a:0.06 t:0 YAP7 a:0.06 t:0 CAD1 a:0.06 t:0 MOTIF 1 5 a:7.85 1.57 t:3.22 0.64 ref:5 8.61 1.72 MOTIF 2 5 a:7.66 1.53 t:7.29 1.46 ref:5 8.61 1.72 MOTIF 3 5 a:9.04 1.81 t:0 0 ref:5 8.61 1.72 YPL207W YLR220W YIL013C YER174C YGL187C YDR529C YFL027C YDR384C YDR077W YPR145W YLL027W YHR006W YBL099W YGR234W YKL182W YHR051W MOTIF 1 total 15 YBL099W 3 YKL182W 3 YIL013C 2 YGL187C 1 YDR529C 1 YDR384C 1 YDR077W 1 YPR145W 1 YHR006W 1 YGR234W 1 MOTIF 1 total 9.42000000000001 YDR384C 2.48 YPR145W 1.48 YGL187C 1.27 YIL013C 0.87 YBL099W 0.72 YKL182W 0.72 YDR077W 0.51 YFL027C 0.43 YHR006W 0.24 YLL027W 0.23 YLR220W 0.16 YGR234W 0.12 YDR529C 0.11 YPL207W 0.08 MOTIF 2 total 21 YDR384C 7 YKL182W 3 YGL187C 2 YPR145W 2 YBL099W 2 YLR220W 1 YIL013C 1 YFL027C 1 YDR077W 1 YHR006W 1 MOTIF 2 total 15.73 YDR384C 4.68 YGL187C 1.96 YFL027C 1.45 YBL099W 1.39 YPR145W 1.35 YKL182W 1.29 YIL013C 1.18 YHR006W 0.79 YDR077W 0.76 YLR220W 0.44 YLL027W 0.21 YGR234W 0.17 YDR529C 0.06 MOTIF 3 total 17 YLL027W 5 YIL013C 3 YLR220W 2 YHR006W 2 YGR234W 2 YER174C 1 YGL187C 1 YKL182W 1 MOTIF 3 total 0 INO4_S24_G19 MOTIF 1 INO4 0 6 + XBP1 0.64 -4 + MOTIF 2 INO2 1 0 + INO4 1 -4 - MOTIF 3 INO4 0 6 + ROX1 1 4 - MOTIF 2 MOTIF 3 MOTIF 1 MOTIF 1 a:14 t:0.05 YAP1 a:0.07 t:0 YAP7 a:0.07 t:0 MOTIF 2 a:19 t:14.52 INO4 a:0.84 t:0.06 INO2 a:0.53 t:0 MOTIF 3 a:17 t:13.24 MOTIF 1 10 a:10.45 1.05 t:17.53 1.75 ref:10 11.23 1.12 MOTIF 2 10 a:12.13 1.21 t:5.96 0.6 ref:10 11.23 1.12 MOTIF 3 10 a:11.37 1.14 t:3.77 0.38 ref:10 11.23 1.12 YOR316C YJL048C YEL040W YPL231W YBL106C YNL169C YER026C YGR157W YKL182W YPR013C YDR497C YDR050C YNR017W YJL167W YER043C YJR104C YBR029C YDR146C YHR123W MOTIF 1 total 14 YNR017W 3 YJR104C 3 YJL048C 2 YER043C 2 YNL169C 1 YPR013C 1 YEL040W 1 YJL167W 1 MOTIF 1 total 0.05 YNR017W 0.05 MOTIF 2 total 19 YDR050C 3 YKL182W 2 YDR497C 2 YPR013C 2 YJL048C 1 YNR017W 1 YJL167W 1 YPL231W 1 YJR104C 1 YER026C 1 YNL169C 1 YBR029C 1 YGR157W 1 YDR146C 1 MOTIF 2 total 14.52 YPR013C 3.49 YKL182W 3.16 YDR146C 1.78 YNR017W 1.38 YJL048C 1.29 YJL167W 1.08 YER043C 0.94 YOR316C 0.73 YER026C 0.21 YGR157W 0.16 YDR497C 0.15 YHR123W 0.15 MOTIF 3 total 17 YKL182W 5 YNR017W 3 YJL167W 2 YER043C 1 YPL231W 1 YBL106C 1 YDR146C 1 YDR497C 1 YPR013C 1 YHR123W 1 MOTIF 3 total 13.24 YNR017W 2.23 YPR013C 2.14 YKL182W 1.97 YJL167W 1.38 YEL040W 1.07 YDR146C 1.01 YJL048C 0.93 YBR029C 0.53 YER043C 0.38 YPL231W 0.37 YOR316C 0.28 YER026C 0.27 YDR050C 0.25 YDR497C 0.18 YGR157W 0.11 YNL169C 0.08 YHR123W 0.06 LEU3_S11_G9 MOTIF 1 LEU3 1 0 + YDR026c 0.88 5 + MOTIF 2 BAS1 1 -3 + GCN4 0.95 -3 + LEU3 0 -6 - MOTIF 3 LEU3 0 5 - MOTIF 1 LEU3 1 0 - YDR026c 0.89 5 - MOTIF 2 BAS1 1 -3 + GCN4 1 -3 + MOTIF 3 HSF1 0.49 -3 + MET31 0.59 -5 - MET32 0.61 -5 - SPT23 0.99 -4 - THI2 0.33 -4 - MOTIF 1 a:12 t:11.06 LEU3 a:0.92 t:0.91 MOTIF 2 a:10 t:9.87 GCN4 a:0.5 t:0.39 MOTIF 3 a:9 t:3.95 MOTIF 1 10 a:15.69 1.57 t:15.54 1.55 ref:10 10.82 1.08 MOTIF 2 10 a:13.14 1.31 t:11.89 1.19 ref:10 10.82 1.08 MOTIF 3 10 a:14.73 1.47 t:9.01 0.9 ref:10 10.82 1.08 YOR226C YMR108W YOR271C YGL009C YKL120W YNL104C YLR356W YJR016C YBR068C MOTIF 1 total 12 YLR356W 2 YGL009C 2 YKL120W 2 YOR226C 1 YMR108W 1 YOR271C 1 YNL104C 1 YJR016C 1 YBR068C 1 MOTIF 1 total 11.06 YLR356W 1.82 YGL009C 1.82 YKL120W 1.82 YOR226C 1.05 YMR108W 0.91 YOR271C 0.91 YNL104C 0.91 YJR016C 0.91 YBR068C 0.91 MOTIF 2 total 10 YNL104C 4 YMR108W 2 YLR356W 1 YJR016C 1 YGL009C 1 YKL120W 1 MOTIF 2 total 9.87 YNL104C 3.22 YMR108W 1.77 YGL009C 0.97 YLR356W 0.91 YJR016C 0.91 YOR226C 0.77 YKL120W 0.65 YBR068C 0.39 YOR271C 0.28 MOTIF 3 total 9 YBR068C 3 YOR271C 2 YMR108W 1 YNL104C 1 YLR356W 1 YJR016C 1 MOTIF 3 total 3.95 YNL104C 1.65 YOR271C 1.22 YLR356W 1.08 MAC1_S5_G4 MOTIF 1 MAC1 0 -3 - RLM1 0.38 5 + MOTIF 2 ACE2 0.99 -2 - MAC1 0 -3 + SWI5 0.32 -2 - MOTIF 3 MAC1 0 3 + NRG1 0.98 2 - RTG3 0.32 2 + ZAP1 0.26 0 - MOTIF 1 RLM1 0.47 -2 - MOTIF 2 MOTIF 3 MOTIF 1 a:4 t:3.7 HAP1 a:0.25 t:0.24 MOTIF 2 a:5 t:2.41 MOTIF 3 a:5 t:0 AFT2 a:0.2 t:0 RCS1 a:0.2 t:0 MOTIF 1 7 a:11.54 1.65 t:10.99 1.57 ref:7 12.06 1.72 MOTIF 2 7 a:10.22 1.46 t:5 0.71 ref:7 12.06 1.72 MOTIF 3 7 a:10.41 1.49 t:0 0 ref:7 12.06 1.72 YER145C YPL177C YJR050W YPR124W MOTIF 1 total 4 YER145C 3 YJR050W 1 MOTIF 1 total 3.7 YER145C 2.83 YJR050W 0.87 MOTIF 2 total 5 YER145C 5 MOTIF 2 total 2.41 YER145C 1.58 YJR050W 0.57 YPL177C 0.26 MOTIF 3 total 5 YPL177C 2 YER145C 1 YJR050W 1 YPR124W 1 MOTIF 3 total 0 MET31_S5_G4 MOTIF 1 GCR1 0.33 5 + MET31 1 0 - MET32 1 0 - MET4 0.99 2 - RTG3 0.6 2 + MOTIF 2 BAS1 1 0 + MET31 0 0 + MOTIF 3 HAP1 0.83 -4 + MET31 0 0 + SIP4 0.42 5 + MOTIF 2 BAS1 1 0 + GCN4 0.28 0 + MOTIF 1 GCR1 0.39 5 - MET31 1 0 + MET32 1 0 + MET4 0.99 2 + RTG3 0.34 2 - MOTIF 3 MOTIF 1 a:3 t:2.52 MET32 a:0.67 t:0.73 MET31 a:0.67 t:0.73 MET4 a:0.33 t:0.39 MOTIF 2 a:5 t:3.92 BAS1 a:0.4 t:0.44 MOTIF 3 a:5 t:0 MOTIF 1 9 a:15.6 1.73 t:15.05 1.67 ref:9 15.5 1.72 MOTIF 2 9 a:12.7 1.41 t:12.24 1.36 ref:9 15.5 1.72 MOTIF 3 9 a:12.57 1.4 t:0 0 ref:9 15.5 1.72 YNL277W YLR179C YAL012W YER092W MOTIF 1 total 3 YER092W 2 YLR179C 1 MOTIF 1 total 2.52 YER092W 1.65 YLR179C 0.8 YNL277W 0.07 MOTIF 2 total 5 YER092W 4 YLR179C 1 MOTIF 2 total 3.92 YER092W 2.92 YLR179C 0.94 YAL012W 0.06 MOTIF 3 total 5 YLR179C 3 YER092W 2 MOTIF 3 total 0 MET32_S13_G10 MOTIF 1 GCR1 0.47 5 + MET31 1 0 - MET32 1 0 - MET4 1 2 - RTG3 0.52 2 + MOTIF 2 CBF1 1 -1 - MET32 0 5 - PHO2 0.29 -4 - PHO4 1 -2 - RTG3 0.96 1 - SKO1 0.54 2 - TYE7 1 0 + MOTIF 3 MET32 0 5 - MOTIF 1 GCR1 0.63 5 - MET31 1 0 + MET32 1 0 + MET4 0.99 2 + MOTIF 2 CBF1 1 -1 - PHO2 0.3 -4 - PHO4 1 -2 - RTG3 0.97 1 - SKO1 0.65 2 - TYE7 1 0 + MOTIF 3 MOTIF 1 a:11 t:9.77 MET32 a:0.82 t:0.75 MET31 a:0.27 t:0.21 MET4 a:0.18 t:0.11 MOTIF 2 a:10 t:9.25 CBF1 a:0.8 t:0.78 TYE7 a:0.1 t:0.1 MOTIF 3 a:5 t:0 MOTIF 1 9 a:13.53 1.5 t:13.15 1.46 ref:9 15.5 1.72 MOTIF 2 9 a:14.12 1.57 t:13.91 1.55 ref:9 15.5 1.72 MOTIF 3 9 a:12.04 1.34 t:0 0 ref:9 15.5 1.72 YKL001C YJR009C YBR213W YAL012W YLR092W YLR179C YDL059C YNL277W YER092W YGR055W MOTIF 1 total 11 YER092W 3 YGR055W 3 YKL001C 1 YBR213W 1 YLR092W 1 YLR179C 1 YDL059C 1 MOTIF 1 total 9.77 YGR055W 2.84 YER092W 1.98 YLR092W 1.64 YLR179C 1.36 YDL059C 0.91 YKL001C 0.7 YBR213W 0.29 YNL277W 0.05 MOTIF 2 total 10 YLR092W 2 YER092W 2 YJR009C 1 YKL001C 1 YAL012W 1 YBR213W 1 YDL059C 1 YNL277W 1 MOTIF 2 total 9.25 YER092W 1.81 YLR092W 1.79 YKL001C 1.11 YJR009C 0.91 YBR213W 0.91 YNL277W 0.91 YAL012W 0.91 YDL059C 0.9 MOTIF 3 total 5 YAL012W 1 YBR213W 1 YLR092W 1 YER092W 1 YNL277W 1 MOTIF 3 total 0 MET4_S5_G5 MOTIF 1 MET31 1 0 + MET32 1 0 + MET4 1 2 + MOTIF 2 BAS1 1 -6 - GCN4 1 -6 - MET4 0 9 - MOTIF 3 MET4 0.01 10 + RDS1 0.46 -4 + RTG3 0.67 -9 - MOTIF 3 GCN4 0.62 3 + RDS1 0.25 -4 - MOTIF 1 MET31 1 0 + MET32 1 0 + MET4 1 2 + MOTIF 2 MOTIF 1 a:5 t:3.05 MET4 a:0.6 t:0.63 CBF1 a:0.4 t:0.22 MET32 a:0.4 t:0.58 MET31 a:0.4 t:0.58 MOTIF 2 a:3 t:0.32 BAS1 a:1 t:0.25 GCN4 a:0.33 t:0 MOTIF 3 a:2 t:2.35 MOTIF 1 15 a:17.78 1.19 t:14.27 0.95 ref:15 17.65 1.18 MOTIF 2 15 a:20.48 1.37 t:18.85 1.26 ref:15 17.65 1.18 MOTIF 3 15 a:20.52 1.37 t:14.77 0.98 ref:15 17.65 1.18 YER092W YAL012W YNL277W YLR179C YGL184C MOTIF 1 total 5 YER092W 1 YAL012W 1 YGL184C 1 YNL277W 1 YLR179C 1 MOTIF 1 total 3.05 YER092W 1.01 YLR179C 0.74 YGL184C 0.54 YAL012W 0.53 YNL277W 0.23 MOTIF 2 total 3 YER092W 2 YGL184C 1 MOTIF 2 total 0.32 YER092W 0.24 YNL277W 0.08 MOTIF 3 total 2 YER092W 2 MOTIF 3 total 2.35 YER092W 1.47 YLR179C 0.88 MOT3_S11_G8 MOTIF 1 MOT3 0 -2 - MSN2 0.93 5 - RPN4 0.64 5 + STB5 0.96 -1 - MOTIF 2 GAL80 0.39 13 + MOT3 0 -1 - PUT3 0.68 14 + RDS1 0.87 3 + SIP4 0.46 -2 - STB4 0.38 -1 - STB5 0.44 -2 - MOTIF 3 CIN5 0.29 4 - DAL80 1 1 - DAL82 0.96 1 - GAT1 1 2 - GLN3 0.8 1 - GZF3 0.99 1 - MOT3 0 -2 - MOTIF 1 MSN2 0.26 5 - STB5 0.81 -1 - MOTIF 3 DAL80 1 1 + GAT1 1 2 + GZF3 0.98 1 + MOTIF 2 STB5 0.72 -2 + MOTIF 1 a:10 t:11.69 PHO2 a:0.1 t:0.08 ABF1 a:0.1 t:0.08 AFT2 a:0.1 t:0.18 MOTIF 2 a:12 t:9.26 AFT2 a:0.08 t:0.18 MOTIF 3 a:7 t:7.43 MOTIF 1 6 a:9.27 1.55 t:7.74 1.29 ref:6 8.06 1.34 MOTIF 2 6 a:8.06 1.34 t:6.18 1.03 ref:6 8.06 1.34 MOTIF 3 6 a:10.08 1.68 t:8.9 1.48 ref:6 8.06 1.34 YGR142W YEL060C YDR077W YIL119C YMR106C YNL036W YPL135W YKR042W MOTIF 1 total 10 YEL060C 3 YPL135W 3 YIL119C 2 YDR077W 1 YNL036W 1 MOTIF 1 total 11.69 YEL060C 4.69 YIL119C 2.87 YPL135W 2.65 YNL036W 0.91 YDR077W 0.5 YMR106C 0.07 MOTIF 2 total 12 YNL036W 4 YEL060C 3 YPL135W 3 YDR077W 1 YIL119C 1 MOTIF 2 total 9.26 YEL060C 4.54 YIL119C 1.72 YPL135W 1.57 YNL036W 0.87 YDR077W 0.49 YMR106C 0.07 MOTIF 3 total 7 YIL119C 3 YEL060C 1 YMR106C 1 YNL036W 1 YPL135W 1 MOTIF 3 total 7.43 YIL119C 2.66 YPL135W 1.78 YEL060C 1.67 YNL036W 0.88 YMR106C 0.27 YDR077W 0.17 MSN2_S15_G15 MOTIF 1 MSN2 1 1 - MSN4 1 1 - MOTIF 2 DAL80 0.9 -3 + MSN2 0 5 + YHP1 0.28 -5 + MOTIF 3 GCR1 0.4 -1 - MSN2 0 5 + MOTIF 2 ROX1 0.33 3 + YHP1 0.4 -5 - YOX1 0.83 -1 - MOTIF 1 MSN2 1 1 + MSN4 1 1 + MOTIF 3 ADR1 0.43 -1 - MSN2 1 0 - MSN4 1 0 - MOTIF 1 a:18 t:13.74 MSN2 a:0.5 t:0.52 MSN4 a:0.11 t:0.12 MOTIF 2 a:10 t:6.76 MOTIF 3 a:11 t:4.4 GCR1 a:0.27 t:0 MOTIF 1 9 a:9.82 1.09 t:9.71 1.08 ref:9 11.67 1.3 MOTIF 2 9 a:11.23 1.25 t:9.91 1.1 ref:9 11.67 1.3 MOTIF 3 9 a:10.51 1.17 t:9.16 1.02 ref:9 11.67 1.3 YKR066C YGR256W YMR087W YGR088W YLR258W YKL085W YDR032C YER177W YJL164C YPR160W YDR171W YJR046W YKL063C YOL114C MOTIF 1 total 18 YPR160W 3 YLR258W 2 YER177W 2 YJL164C 2 YDR171W 2 YGR256W 1 YGR088W 1 YDR032C 1 YKL085W 1 YOL114C 1 YKL063C 1 YJR046W 1 MOTIF 1 total 13.74 YPR160W 2.77 YGR088W 1.7 YLR258W 1.62 YDR171W 1.38 YER177W 1.14 YJR046W 0.88 YOL114C 0.88 YJL164C 0.87 YGR256W 0.87 YKL085W 0.84 YKL063C 0.79 MOTIF 2 total 10 YMR087W 4 YOL114C 2 YJL164C 1 YPR160W 1 YJR046W 1 YKL063C 1 MOTIF 2 total 6.76 YMR087W 2.09 YOL114C 1.35 YKL063C 1.07 YJL164C 0.71 YER177W 0.57 YLR258W 0.32 YGR256W 0.3 YJR046W 0.14 YGR088W 0.12 YDR032C 0.09 MOTIF 3 total 11 YER177W 4 YKL063C 2 YKR066C 1 YGR088W 1 YKL085W 1 YLR258W 1 YPR160W 1 MOTIF 3 total 4.4 YPR160W 1.17 YGR088W 0.44 YDR171W 0.43 YLR258W 0.42 YDR032C 0.31 YER177W 0.28 YKL063C 0.26 YJR046W 0.24 YGR256W 0.23 YOL114C 0.23 YKL085W 0.22 YJL164C 0.17 MSN4_S21_G17 MOTIF 1 GAT1 0.98 3 + GZF3 0.72 2 + MSN2 1 -1 + MSN4 1 -1 + RPH1 0.51 0 - MOTIF 2 MSN4 0 3 - RDS1 0.96 4 + SUT1 0.28 -3 - MOTIF 3 MET31 0.85 -3 + MET32 0.94 -3 + MSN4 0 -3 + MOTIF 1 GAT1 0.96 3 + GZF3 0.69 2 + MSN2 1 -1 + MSN4 1 -1 + RPH1 0.48 0 - MOTIF 2 RDS1 0.99 4 - MOTIF 3 MOTIF 1 a:23 t:20.68 MSN4 a:0.61 t:0.6 MSN2 a:0.09 t:0.08 DAL82 a:0.04 t:0.04 MOTIF 2 a:19 t:14.84 SKN7 a:0.05 t:0.04 LEU3 a:0.05 t:0.06 RDS1 a:0.05 t:0.05 UGA3 a:0.05 t:0.04 MOTIF 3 a:13 t:0 HSF1 a:0.08 t:0 MOTIF 1 7 a:10.34 1.48 t:10.12 1.45 ref:7 9.44 1.35 MOTIF 2 7 a:8.97 1.28 t:8.57 1.22 ref:7 9.44 1.35 MOTIF 3 7 a:10.21 1.46 t:0 0 ref:7 9.44 1.35 YPR065W YDR258C YOR226C YKL085W YNL241C YBR072W YML100W-A YOR018W YIL051C YHR087W YMR251W-A YKR066C YMR119W YGR088W YGR192C YAL005C YGR052W MOTIF 1 total 23 YGR088W 4 YMR251W-A 3 YHR087W 2 YDR258C 2 YBR072W 2 YAL005C 2 YGR052W 2 YMR119W 1 YKL085W 1 YOR226C 1 YNL241C 1 YIL051C 1 YOR018W 1 MOTIF 1 total 20.68 YGR088W_ 2.96 YHR087W_ 2 YMR251W- 1.89 YDR258C_ 1.79 YAL005C_ 1.66 YBR072W_ 1.41 YIL051C_ 1.14 YGR052W_ 1.03 YNL241C_ 1 YOR226C_ 0.91 YMR251W-A 0.91 YMR119W_ 0.91 YGR052W 0.91 YOR018W_ 0.83 YKL085W_ 0.8 YPR065W_ 0.21 YGR192C_ 0.2 YKR066C_ 0.12 MOTIF 2 total 19 YMR251W-A 4 YGR052W 4 YPR065W 3 YOR226C 2 YNL241C 2 YKR066C 1 YMR119W 1 YKL085W 1 YAL005C 1 MOTIF 2 total 14.84 YMR251W- 3.6 YGR052W_ 2.9 YPR065W_ 1.71 YOR226C_ 1.61 YNL241C_ 1.61 YAL005C_ 1.02 YMR119W_ 0.83 YKR066C_ 0.79 YIL051C_ 0.32 YBR072W_ 0.22 YGR088W_ 0.18 YML100W- 0.05 MOTIF 3 total 13 YMR119W 4 YAL005C 3 YBR072W 2 YMR251W-A 1 YHR087W 1 YIL051C 1 YGR052W 1 MOTIF 3 total 0 PHO2_S3_G3 MOTIF 1 CBF1 1 1 + INO2 1 0 + PHO2 0.43 -7 - PHO4 1 0 + TYE7 1 -4 - MOTIF 2 ADR1 0.26 -6 - PHO2 0.68 -2 - RGT1 0.5 -7 + STB5 0.65 -7 + MOTIF 3 PHO2 0 -3 - MOTIF 1 CBF1 1 1 + INO2 1 0 + INO4 0.33 -5 - PHO2 0.39 -7 - PHO4 1 0 + SKO1 0.26 -6 - TYE7 1 -4 - MOTIF 2 PHO2 0.26 -2 + MOTIF 3 MOTIF 1 a:4 t:3.58 PHO4 a:1 t:1 CBF1 a:1 t:1 PHO2 a:0.25 t:0.25 MOTIF 2 a:2 t:0.94 ABF1 a:0.5 t:0.47 PHO2 a:0.5 t:0.47 MOTIF 3 a:1 t:0.28 ROX1 a:1 t:1 MOTIF 1 11 a:15.36 1.4 t:14.6 1.33 ref:11 14.51 1.32 MOTIF 2 11 a:16.05 1.46 t:12.7 1.15 ref:11 14.51 1.32 MOTIF 3 11 a:22 2 t:22 2 ref:11 14.51 1.32 YNL036W YER035W YHR137W MOTIF 1 total 4 YHR137W 4 MOTIF 1 total 3.58 YHR137W 3.58 MOTIF 2 total 2 YNL036W 1 YHR137W 1 MOTIF 2 total 0.94 YNL036W 0.57 YHR137W 0.37 MOTIF 3 total 1 YNL036W 1 MOTIF 3 total 0.28 YNL036W 0.28 PHO4_S21_G15 MOTIF 1 CBF1 1 1 + PHO2 0.72 -2 + PHO4 1 0 + MOTIF 2 PDR3 0.8 -1 + PHO4 0 -3 + SIP4 0.47 -2 - MOTIF 3 PHO4 0 -3 - MOTIF 1 CBF1 1 1 - PHO2 0.55 -2 - PHO4 1 0 - TYE7 0.78 0 + MOTIF 2 MOTIF 3 MOTIF 1 a:21 t:17.97 PHO4 a:0.76 t:0.79 CBF1 a:0.43 t:0.46 PHO2 a:0.05 t:0.05 INO2 a:0.05 t:0.05 MOTIF 2 a:8 t:7.87 UME6 a:0.13 t:0.04 SWI4 a:0.13 t:0.04 MOTIF 3 a:14 t:2.52 MOTIF 1 7 a:11.03 1.58 t:11.01 1.57 ref:7 9.25 1.32 MOTIF 2 7 a:9.53 1.36 t:3.86 0.55 ref:7 9.25 1.32 MOTIF 3 7 a:9.41 1.34 t:4.98 0.71 ref:7 9.25 1.32 YEL001C YPL018W YOR163W YML121W YBR296C YCL035C YOL136C YHR137W YJL117W YDR441C YDR281C YGL133W YGR253C YLR267W YJR058C MOTIF 1 total 21 YML121W 4 YHR137W 4 YDR281C 3 YPL018W 2 YBR296C 2 YOR163W 1 YCL035C 1 YOL136C 1 YJL117W 1 YDR441C 1 YJR058C 1 MOTIF 1 total 17.97 YHR137W 3.62 YML121W 3.23 YDR281C 2.27 YPL018W 1.86 YBR296C 1.33 YOL136C 0.97 YCL035C 0.91 YDR441C 0.91 YJL117W 0.91 YOR163W 0.65 YJR058C 0.62 YLR267W 0.37 YGL133W 0.32 MOTIF 2 total 8 YHR137W 3 YOR163W 2 YDR441C 2 YOL136C 1 MOTIF 2 total 7.87 YOL136C 1.54 YHR137W 1.37 YJR058C 0.99 YDR281C 0.99 YDR441C 0.8 YOR163W 0.78 YML121W 0.76 YGR253C 0.34 YBR296C 0.22 YPL018W 0.08 MOTIF 3 total 14 YHR137W 3 YOL136C 2 YDR441C 2 YGR253C 2 YJR058C 2 YGL133W 1 YDR281C 1 YJL117W 1 MOTIF 3 total 2.52 YOL136C 0.46 YDR281C 0.43 YJR058C 0.4 YML121W 0.32 YHR137W 0.3 YDR441C 0.29 YPL018W 0.12 YOR163W 0.08 YBR296C 0.07 YCL035C 0.05 PUT3_S4_G3 MOTIF 1 ADR1 0.78 -1 + GCR1 0.38 -8 + HAP1 0.74 7 - LEU3 0.41 6 - PUT3 0.03 1 - MOTIF 2 PDR3 0.31 -11 - PUT3 0.01 13 + SUT1 0.81 -11 - UME6 0.96 -9 - MOTIF 3 ABF1 1 -1 + GAL4 0.4 -12 + PUT3 0.15 12 - RGT1 0.27 -12 + RTG3 0.91 0 + MOTIF 1 ADR1 0.74 -1 + GCR1 0.39 -8 + HAP1 0.7 7 - LEU3 0.36 6 - MOTIF 2 FKH1 0.28 -10 - UME6 0.82 -9 + MOTIF 3 MOTIF 1 a:3 t:2.73 PUT3 a:1 t:1 MOTIF 2 a:3 t:0.87 UME6 a:0.67 t:0.64 MOTIF 3 a:3 t:0 MOTIF 1 18 a:26.14 1.45 t:26.14 1.45 ref:18 10.32 0.57 MOTIF 2 18 a:27.07 1.5 t:26.96 1.5 ref:18 10.32 0.57 MOTIF 3 18 a:18.01 1 t:0 0 ref:18 10.32 0.57 YBL064C YOR306C YHR037W MOTIF 1 total 3 YBL064C 1 YHR037W 1 YOR306C 1 MOTIF 1 total 2.73 YBL064C 0.91 YHR037W 0.91 YOR306C 0.91 MOTIF 2 total 3 YBL064C 3 MOTIF 2 total 0.87 YBL064C 0.87 MOTIF 3 total 3 YBL064C 2 YOR306C 1 MOTIF 3 total 0 RDS1_S8_G7 MOTIF 1 RDS1 1 1 + YDR026c 0.87 6 + MOTIF 2 RDS1 0 4 - MOTIF 3 MET31 1 2 - MET32 1 2 - RDS1 0 4 + TEC1 0.95 3 - MOTIF 1 RDS1 1 1 + YDR026c 0.88 6 + MOTIF 2 MSN2 0.33 5 - MOTIF 3 MOTIF 1 a:13 t:9.75 RDS1 a:0.54 t:0.6 SKN7 a:0.15 t:0.13 SIP4 a:0.15 t:0.17 STP1 a:0.08 t:0.05 MOTIF 2 a:5 t:4.43 MOTIF 3 a:3 t:0 MOTIF 1 8 a:11.56 1.45 t:11.5 1.44 ref:8 10.69 1.34 MOTIF 2 8 a:11.63 1.45 t:4.84 0.61 ref:8 10.69 1.34 MOTIF 3 8 a:13.47 1.68 t:0 0 ref:8 10.69 1.34 YPR127W YFL024C YBR015C YNL241C YOL125W YGL157W YGR100W MOTIF 1 total 13 YNL241C 4 YOL125W 3 YPR127W 2 YBR015C 1 YFL024C 1 YGL157W 1 YGR100W 1 MOTIF 1 total 9.75 YNL241C 2.35 YOL125W 2.19 YPR127W 1.51 YBR015C 0.98 YFL024C 0.91 YGL157W 0.91 YGR100W 0.9 MOTIF 2 total 5 YFL024C 2 YPR127W 1 YNL241C 1 YOL125W 1 MOTIF 2 total 4.43 YFL024C 1.5 YNL241C 1.15 YOL125W 0.93 YPR127W 0.28 YGR100W 0.25 YBR015C 0.17 YGL157W 0.15 MOTIF 3 total 3 YNL241C 3 MOTIF 3 total 0 RFX1_S9_G7 MOTIF 1 RFX1 1 0 - MOTIF 2 DAL80 0.66 -1 + GLN3 0.5 4 + RFX1 0 -8 + MOTIF 3 FKH1 1 -1 + FKH2 0.98 0 - RFX1 0 -9 + ROX1 0.96 3 + MOTIF 3 FKH1 1 -1 - FKH2 0.96 0 + ROX1 0.81 3 - MOTIF 1 RFX1 1 0 + MOTIF 2 MOTIF 1 a:9 t:8.12 RFX1 a:0.89 t:0.89 MOTIF 2 a:5 t:0 MOTIF 3 a:8 t:4.85 FKH2 a:0.13 t:0.14 MOTIF 1 13 a:19.06 1.47 t:18.2 1.4 ref:13 15.51 1.19 MOTIF 2 13 a:17.12 1.32 t:0 0 ref:13 15.51 1.19 MOTIF 3 13 a:15.83 1.22 t:15.01 1.15 ref:13 15.51 1.19 YDR410C YOR267C YGR180C YLR286C YMR177W YIL066C YDL229W MOTIF 1 total 9 YIL066C 3 YGR180C 2 YDR410C 1 YLR286C 1 YMR177W 1 YDL229W 1 MOTIF 1 total 8.12 YIL066C 2.71 YGR180C 1.83 YDL229W 0.91 YDR410C 0.91 YLR286C 0.9 YMR177W 0.86 MOTIF 2 total 5 YGR180C 2 YOR267C 1 YIL066C 1 YDL229W 1 MOTIF 2 total 0 MOTIF 3 total 8 YGR180C 2 YLR286C 2 YDR410C 1 YOR267C 1 YMR177W 1 YIL066C 1 MOTIF 3 total 4.85 YIL066C 1.59 YGR180C 1.15 YMR177W 1.09 YLR286C 0.87 YOR267C 0.15 RGT1_S12_G3 MOTIF 1 PDR3 0.59 -3 - RGT1 0.42 0 + SPT23 0.99 -3 + YDR026c 0.98 6 + MOTIF 2 RGT1 0 -3 - MOTIF 3 RGT1 0 -3 + STB5 0.56 6 - MOTIF 1 PDR3 0.58 -3 + RGT1 0.67 0 - SPT23 0.99 -3 - YDR026c 0.98 6 - MOTIF 3 STB5 0.72 6 - MOTIF 2 DAL80 0.35 -2 - GAL4 0.26 0 - RGT1 0.99 0 - SPT23 0.86 -3 - YDR026c 0.76 6 - MOTIF 1 a:13 t:12.35 RGT1 a:0.69 t:0.67 MOTIF 2 a:11 t:1.89 SUT1 a:0.18 t:0 SKN7 a:0.09 t:0 MOTIF 3 a:6 t:5.42 MOTIF 1 7 a:12.68 1.81 t:12.3 1.76 ref:7 8.61 1.23 MOTIF 2 7 a:8.27 1.18 t:12.01 1.72 ref:7 8.61 1.23 MOTIF 3 7 a:10.65 1.52 t:10.19 1.46 ref:7 8.61 1.23 YER028C YHR094C YKR075C MOTIF 1 total 13 YKR075C 5 YER028C 4 YHR094C 4 MOTIF 1 total 12.35 YKR075C 4.94 YHR094C 3.77 YER028C 3.64 MOTIF 2 total 11 YKR075C 8 YER028C 2 YHR094C 1 MOTIF 2 total 1.89 YKR075C 0.8 YHR094C 0.57 YER028C 0.52 MOTIF 3 total 6 YHR094C 3 YKR075C 2 YER028C 1 MOTIF 3 total 5.42 YKR075C 2.19 YHR094C 2.09 YER028C 1.14 RLM1_S9_G9 MOTIF 1 ACE2 1 -2 + MET4 0.31 9 + RLM1 0 -6 - RPN4 0.85 5 - MOTIF 2 FHL1 0.53 -6 - RLM1 0 -6 - MOTIF 3 ADR1 0.38 -6 + RLM1 0.74 -6 - MOTIF 3 HAP2 0.98 -6 + HAP3 0.98 -6 + HAP5 0.98 -6 + MOTIF 1 MOTIF 2 MOTIF 1 a:7 t:0 MOTIF 2 a:7 t:0 MOTIF 3 a:8 t:3.64 MOTIF 1 10 a:14.49 1.45 t:0 0 ref:10 13.68 1.37 MOTIF 2 10 a:12.96 1.3 t:0 0 ref:10 13.68 1.37 MOTIF 3 10 a:11.95 1.19 t:12.27 1.23 ref:10 13.68 1.37 YIL122W YLR390W-A YJL106W YDR524C YJL159W YLR332W YDR077W YDR085C YKL096W MOTIF 1 total 7 YDR524C 6 YLR390W-A 1 MOTIF 1 total 0 MOTIF 2 total 7 YKL096W 2 YJL159W 1 YLR332W 1 YIL122W 1 YLR390W-A 1 YDR085C 1 MOTIF 2 total 0 MOTIF 3 total 8 YIL122W 2 YDR524C 2 YJL159W 1 YLR332W 1 YLR390W-A 1 YDR085C 1 MOTIF 3 total 3.64 YDR524C 2.64 YJL159W 0.5 YDR085C 0.43 YLR332W 0.07 ROX1_S12_G11 MOTIF 1 ROX1 0 5 + MOTIF 2 ROX1 0 -4 - MOTIF 3 ROX1 0 -5 + SPT23 0.66 4 + MOTIF 2 PDR3 0.3 -2 - MOTIF 1 MOTIF 3 MOTIF 1 a:14 t:0 SUT1 a:0.07 t:0 MOT3 a:0.07 t:0 MOTIF 2 a:9 t:9.68 SOK2 a:0.33 t:0.25 PHD1 a:0.11 t:0.25 MOTIF 3 a:8 t:0 MOTIF 1 9 a:9.36 1.04 t:0 0 ref:9 12.83 1.43 MOTIF 2 9 a:11.46 1.27 t:7.8 0.87 ref:9 12.83 1.43 MOTIF 3 9 a:11.02 1.22 t:0 0 ref:9 12.83 1.43 YLL027W YBL029W YPL230W YNL036W YOL026C YIL119C YLR413W YNL288W YCR065W YAL038W YBR069C MOTIF 1 total 14 YIL119C 6 YBL029W 3 YPL230W 2 YNL036W 1 YAL038W 1 YBR069C 1 MOTIF 1 total 0 MOTIF 2 total 9 YBL029W 4 YIL119C 3 YOL026C 1 YLR413W 1 MOTIF 2 total 9.68 YBL029W 3.1 YIL119C 2.53 YPL230W 1.98 YNL036W 0.89 YOL026C 0.86 YLR413W 0.21 YAL038W 0.06 YNL288W 0.05 MOTIF 3 total 8 YPL230W 3 YOL026C 1 YIL119C 1 YLR413W 1 YBL029W 1 YNL036W 1 MOTIF 3 total 0 RTG3_S5_G5 MOTIF 1 RTG3 0.22 -2 - MOTIF 2 CBF1 0.99 -2 + RTG3 1 0 + SKO1 1 1 + TYE7 1 -2 + MOTIF 3 MAC1 0.56 -2 - RDS1 0.98 4 - RTG3 0 2 + STB4 0.91 -2 + UME6 0.78 6 - MOTIF 3 MAC1 0.67 -2 - RDS1 0.98 4 - STB4 0.86 -2 + UME6 0.79 6 - MOTIF 2 CBF1 0.99 -2 + RTG3 1 0 + SKO1 1 1 + TYE7 1 -2 + MOTIF 1 MSN2 0.31 5 - PHD1 0.54 3 - SKN7 0.52 5 + SUT1 0.64 0 - MOTIF 1 a:4 t:2.56 PHO2 a:0.25 t:0.15 ABF1 a:0.25 t:0.15 MOTIF 2 a:7 t:5.77 RTG3 a:0.43 t:0.4 MOTIF 3 a:4 t:3.81 MOTIF 1 6 a:9.69 1.62 t:9.04 1.51 ref:6 10.32 1.72 MOTIF 2 6 a:9.94 1.66 t:9.19 1.53 ref:6 10.32 1.72 MOTIF 3 6 a:9.62 1.6 t:8.23 1.37 ref:6 10.32 1.72 YNL036W YJL088W YER129W YLL018C YDL066W MOTIF 1 total 4 YNL036W 2 YDL066W 2 MOTIF 1 total 2.56 YDL066W 1.61 YNL036W 0.83 YJL088W 0.12 MOTIF 2 total 7 YNL036W 3 YJL088W 2 YLL018C 1 YDL066W 1 MOTIF 2 total 5.77 YNL036W 2.34 YJL088W 1.61 YDL066W 0.94 YLL018C 0.81 YER129W 0.07 MOTIF 3 total 4 YNL036W 4 MOTIF 3 total 3.81 YNL036W 3.15 YJL088W 0.33 YDL066W 0.24 YLL018C 0.09 SFP1_S24_G15 MOTIF 1 FHL1 1 1 + RAP1 1 0 + SFP1 1 -1 - MOTIF 2 HAP3 0.28 -6 - SFP1 0 6 - MOTIF 3 SFP1 0 -6 - MOTIF 1 FHL1 1 1 - RAP1 1 0 - SFP1 1 -1 + MOTIF 3 THI2 0.31 6 + YAP1 0.59 -6 - MOTIF 2 MOTIF 1 a:30 t:25.01 SFP1 a:0.73 t:0.77 FHL1 a:0.63 t:0.67 RAP1 a:0.47 t:0.47 MOTIF 2 a:9 t:7.06 MOTIF 3 a:13 t:5.43 INO2 a:0.08 t:0 MOTIF 1 10 a:13.08 1.31 t:13.07 1.31 ref:10 8.3 0.83 MOTIF 2 10 a:11.67 1.17 t:4.88 0.49 ref:10 8.3 0.83 MOTIF 3 10 a:12 1.2 t:8.34 0.83 ref:10 8.3 0.83 YOL121C YOR234C YNL069C YDR064W YIL133C YBR048W YML025C YPL090C YBL087C YOR312C YGL136C YBR188C YGL104C YJR123W YML026C MOTIF 1 total 30 YPL090C 3 YBL087C 3 YBR188C 3 YDR064W 2 YNL069C 2 YOL121C 2 YIL133C 2 YBR048W 2 YML025C 2 YGL136C 2 YGL104C 2 YML026C 2 YOR234C 1 YOR312C 1 YJR123W 1 MOTIF 1 total 25.01 YBL087C 2.73 YBR188C 2.58 YPL090C 2.45 YML025C 1.82 YGL136C 1.82 YOL121C 1.8 YGL104C 1.76 YML026C 1.68 YNL069C 1.48 YBR048W 1.47 YIL133C 1.28 YOR234C 1.1 YDR064W 1.08 YOR312C 1.05 YJR123W 0.91 MOTIF 2 total 9 YBR048W 2 YGL104C 2 YNL069C 1 YBL087C 1 YGL136C 1 YBR188C 1 YJR123W 1 MOTIF 2 total 7.06 YGL104C 1.5 YJR123W 1.21 YBL087C 0.81 YNL069C 0.72 YML026C 0.68 YML025C 0.5 YOR234C 0.46 YBR188C 0.43 YOR312C 0.33 YGL136C 0.24 YPL090C 0.1 YDR064W 0.08 MOTIF 3 total 13 YGL104C 5 YOR234C 4 YML025C 2 YGL136C 1 YBR188C 1 MOTIF 3 total 5.43 YGL104C 1.66 YNL069C 1.13 YBR188C 0.96 YJR123W 0.46 YML025C 0.45 YBR048W 0.42 YOR234C 0.25 YBL087C 0.1 SIP4_S6_G3 MOTIF 1 FHL1 0.54 5 - HAP1 0.33 -9 - RDS1 0.4 1 - RGT1 0.99 0 - SIP4 1 0 - UME1 0.25 -7 - YDR026c 1 6 - MOTIF 2 GAT1 0.79 -9 + HAP1 0.72 6 - MCM1 0.32 -7 - NDD1 0.28 -7 - SIP4 0 8 + MOTIF 3 GAT1 0.72 3 + SIP4 0 6 + MOTIF 1 FHL1 0.94 5 + HAP1 0.43 -9 + RDS1 0.26 1 + RGT1 1 0 + SIP4 1 0 + YDR026c 1 6 + MOTIF 2 HAP1 0.54 6 - RFX1 0.27 -8 - MOTIF 3 MOTIF 1 a:5 t:3.72 SIP4 a:0.8 t:0.77 RDS1 a:0.2 t:0.18 SKN7 a:0.2 t:0.18 MOTIF 2 a:2 t:2.84 MOTIF 3 a:4 t:0.14 SKN7 a:0.25 t:0 STP1 a:0.25 t:0 MOTIF 1 13 a:19.08 1.47 t:18.95 1.46 ref:13 13.75 1.06 MOTIF 2 13 a:18.37 1.41 t:13.77 1.06 ref:13 13.75 1.06 MOTIF 3 13 a:15.7 1.21 t:19.05 1.47 ref:13 13.75 1.06 YER065C YOL125W MOTIF 1 total 5 YOL125W 3 YER065C 2 MOTIF 1 total 3.72 YOL125W 2.25 YER065C 1.47 MOTIF 2 total 2 YOL125W 2 MOTIF 2 total 2.84 YOL125W 2.3 YER065C 0.54 MOTIF 3 total 4 YOL125W 4 MOTIF 3 total 0.14 YOL125W 0.14 SKO1_S7_G6 MOTIF 1 INO2 1 3 + SKO1 0 -2 + MOTIF 2 SKO1 0 -2 + MOTIF 3 HAP2 1 1 - HAP3 1 1 - HAP5 1 1 - SKO1 0 -2 - MOTIF 1 INO2 1 3 - MOTIF 3 MOTIF 2 ADR1 0.58 -1 - MOTIF 1 a:6 t:6.44 SOK2 a:0.17 t:0.13 MOTIF 2 a:7 t:4 MOTIF 3 a:5 t:3.22 MOTIF 1 6 a:11.26 1.88 t:10.45 1.74 ref:6 10.34 1.72 MOTIF 2 6 a:9.35 1.56 t:9.38 1.56 ref:6 10.34 1.72 MOTIF 3 6 a:9.7 1.62 t:9.62 1.6 ref:6 10.34 1.72 YHR033W YPR013C YHR096C YOR316C YDR077W YKL096W MOTIF 1 total 6 YHR033W 2 YPR013C 2 YDR077W 2 MOTIF 1 total 6.44 YPR013C 2.47 YHR033W 2.04 YDR077W 1.82 YKL096W 0.11 MOTIF 2 total 7 YPR013C 4 YHR033W 1 YHR096C 1 YDR077W 1 MOTIF 2 total 4 YPR013C 1.82 YHR033W 0.81 YHR096C 0.76 YDR077W 0.61 MOTIF 3 total 5 YPR013C 4 YDR077W 1 MOTIF 3 total 3.22 YPR013C 2.67 YDR077W 0.28 YHR096C 0.27 SNT2_S15_G14 MOTIF 1 ACE2 0.99 3 - SNT2 1 0 + MOTIF 2 SNT2 0 7 - MOTIF 3 DIG1 0.99 2 + FKH1 1 -5 - FKH2 1 6 + SNT2 0 6 + STE12 1 2 + MOTIF 1 ACE2 0.99 3 + SNT2 1 0 - MOTIF 3 FKH1 0.98 -5 + FKH2 0.96 6 - MOTIF 2 MOTIF 1 a:15 t:14.39 SNT2 a:0.93 t:0.91 MOTIF 2 a:10 t:5.19 TYE7 a:0.1 t:0 MOTIF 3 a:9 t:8.44 FKH1 a:0.22 t:0.16 FKH2 a:0.11 t:0.05 STE12 a:0.11 t:0.08 MOTIF 1 11 a:18.18 1.65 t:17.73 1.61 ref:11 11.63 1.06 MOTIF 2 11 a:11.27 1.02 t:5.95 0.54 ref:11 11.63 1.06 MOTIF 3 11 a:15.6 1.42 t:13.15 1.2 ref:11 11.63 1.06 YHR138C YPR184W YCR091W YNL181W YLR176C YIL160C YPR120C YBL075C YJL093C YAL038W YPR104C YBR143C YPR158W YBR139W MOTIF 1 total 15 YIL160C 2 YHR138C 1 YPR184W 1 YCR091W 1 YLR176C 1 YNL181W 1 YPR120C 1 YBL075C 1 YJL093C 1 YAL038W 1 YPR104C 1 YBR143C 1 YPR158W 1 YBR139W 1 MOTIF 1 total 14.39 YIL160C 1.82 YPR120C 1.66 YHR138C 0.91 YPR184W 0.91 YCR091W 0.91 YNL181W 0.91 YLR176C 0.91 YBL075C 0.91 YJL093C 0.91 YPR104C 0.91 YBR143C 0.91 YPR158W 0.91 YBR139W 0.91 YAL038W 0.9 MOTIF 2 total 10 YAL038W 3 YPR104C 2 YHR138C 1 YLR176C 1 YJL093C 1 YBR143C 1 YBR139W 1 MOTIF 2 total 5.19 YNL181W 1.21 YJL093C 1.08 YPR120C 0.96 YLR176C 0.74 YAL038W 0.53 YPR158W 0.28 YIL160C 0.25 YBR139W 0.14 MOTIF 3 total 9 YHR138C 4 YPR104C 2 YJL093C 1 YAL038W 1 YBR139W 1 MOTIF 3 total 8.44 YPR104C 2.42 YAL038W 1.94 YHR138C 1.64 YJL093C 0.62 YPR158W 0.62 YBR139W 0.42 YCR091W 0.3 YLR176C 0.24 YIL160C 0.13 YBR143C 0.06 YPR184W 0.05 SPT2_S7_G7 MOTIF 1 CIN5 0.99 4 + DAL80 0.98 1 + GAT1 1 2 + GZF3 0.93 1 + SPT2 0 7 + MOTIF 2 INO4 0.75 -7 + SPT2 0 -6 - MOTIF 3 DAL80 1 -1 - SPT2 0 7 + MOTIF 1 CIN5 0.74 4 + DAL80 1 1 + DAL82 0.87 1 + GAT1 1 2 + GLN3 0.77 1 + GZF3 0.89 1 + MOTIF 3 MOTIF 2 MOTIF 1 a:6 t:5.34 MOTIF 2 a:7 t:0 DIG1 a:0.14 t:0 SPT2 a:0.14 t:0 MOTIF 3 a:7 t:1.4 CIN5 a:0.14 t:0 RLM1 a:0.14 t:0.11 MOTIF 1 11 a:16.02 1.46 t:12.19 1.11 ref:11 11.85 1.08 MOTIF 2 11 a:15.28 1.39 t:0 0 ref:11 11.85 1.08 MOTIF 3 11 a:15.96 1.45 t:9.84 0.89 ref:11 11.85 1.08 YDR524C YBR159W YOL086W-A YHR175W YJL148W YAL037W MOTIF 1 total 6 YAL037W 3 YDR524C 2 YHR175W 1 MOTIF 1 total 5.34 YAL037W 1.73 YHR175W 1.71 YDR524C 1.6 YOL086W- 0.2 YJL148W 0.1 MOTIF 2 total 7 YOL086W-A 3 YDR524C 1 YHR175W 1 YJL148W 1 YAL037W 1 MOTIF 2 total 0 MOTIF 3 total 7 YDR524C 3 YBR159W 1 YOL086W-A 1 YHR175W 1 YAL037W 1 MOTIF 3 total 1.4 YDR524C 1 YAL037W 0.18 YJL148W 0.14 YOL086W- 0.08 SPT23_S15_G12 MOTIF 1 MET31 0.85 -3 + MET32 0.71 -3 + SPT23 0 -3 + MOTIF 2 SPT23 0 3 - MOTIF 3 DAL80 0.44 -3 - GZF3 0.54 -3 - SPT23 0 -4 - YAP6 0.33 -3 + MOTIF 3 DAL80 0.78 -3 - GZF3 0.63 -3 - RFX1 0.41 -3 + YAP6 0.26 -3 + MOTIF 1 MET31 0.46 -3 - MOTIF 2 MOTIF 1 a:8 t:6.17 RIM101 a:0.13 t:0.14 MOTIF 2 a:12 t:8.95 SPT23 a:0.08 t:0 MOTIF 3 a:16 t:10.65 MOTIF 1 8 a:10.04 1.25 t:8.83 1.1 ref:8 9.69 1.21 MOTIF 2 8 a:9.85 1.23 t:6.48 0.81 ref:8 9.69 1.21 MOTIF 3 8 a:8.72 1.09 t:8.59 1.07 ref:8 9.69 1.21 YFR002W YOR148C YLR023C YCL054W YMR258C YJR051W YGL001C YMR118C YJR011C YLR047C YNL001W MOTIF 1 total 8 YLR047C 3 YJR011C 2 YLR023C 2 YOR148C 1 MOTIF 1 total 6.17 YJR011C 2.36 YLR047C 1.84 YLR023C 1.18 YOR148C 0.79 MOTIF 2 total 12 YGL001C 3 YJR011C 3 YLR047C 2 YCL054W 2 YMR258C 2 MOTIF 2 total 8.95 YJR011C 2.31 YLR023C 1.97 YCL054W 1.92 YGL001C 1.46 YLR047C 0.94 YOR148C 0.19 YMR118C 0.09 YFR002W 0.07 MOTIF 3 total 16 YJR011C 9 YMR118C 2 YJR051W 1 YGL001C 1 YLR047C 1 YFR002W 1 YNL001W 1 MOTIF 3 total 10.65 YJR011C 6.62 YLR047C 1.3 YNL001W 0.83 YGL001C 0.52 YMR118C 0.46 YFR002W 0.29 YJR051W 0.23 YCL054W 0.15 YMR258C 0.11 YOR148C 0.09 YLR023C 0.05 STB1_S23_G12 MOTIF 1 PDR1 0.43 3 + RDS1 0.27 4 + STB1 0 -4 + UME6 0.77 6 + MOTIF 2 PHO2 0.4 -6 - STB1 0.01 3 + SWI4 1 2 + MOTIF 3 STB1 0 4 - MOTIF 2 STB1 1 3 + SWI4 1 2 + SWI6 1 -3 - MOTIF 3 MOTIF 1 MOTIF 1 a:13 t:11.83 NDD1 a:0.08 t:0 MCM1 a:0.08 t:0.02 MOTIF 2 a:29 t:18.8 SWI6 a:0.52 t:0.56 STB1 a:0.48 t:0.53 SWI4 a:0.45 t:0.53 MBP1 a:0.21 t:0.19 PHD1 a:0.03 t:0.04 STE12 a:0.03 t:0.04 MOTIF 3 a:17 t:11.51 STB1 a:0.06 t:0.01 FKH2 a:0.06 t:0.01 MOTIF 1 10 a:10.56 1.06 t:3.31 0.33 ref:10 8.17 0.82 MOTIF 2 10 a:11.83 1.18 t:10.14 1.01 ref:10 8.17 0.82 MOTIF 3 10 a:10.54 1.05 t:5.83 0.58 ref:10 8.17 0.82 YOR372C YOL007C YHR061C YKL096W-A YNL289W YDR524C YOR246C YPL256C YCR065W YGR221C YGR109C YMR307W MOTIF 1 total 13 YDR524C 3 YPL256C 2 YKL096W-A 2 YMR307W 2 YNL289W 2 YOR246C 1 YGR109C 1 MOTIF 1 total 11.83 YDR524C 3.08 YKL096W- 1.85 YNL289W 1.38 YMR307W 1.31 YPL256C 1.09 YOR246C 1.08 YGR221C 0.57 YOL007C 0.44 YOR372C 0.37 YCR065W 0.3 YHR061C 0.24 YGR109C 0.12 MOTIF 2 total 29 YPL256C 5 YOL007C 4 YNL289W 4 YOR246C 4 YOR372C 2 YKL096W-A 2 YCR065W 2 YMR307W 2 YHR061C 1 YDR524C 1 YGR109C 1 YGR221C 1 MOTIF 2 total 18.8 YNL289W 4.12 YOR246C 2.75 YPL256C 2.41 YKL096W- 1.81 YCR065W 1.66 YOL007C 1.36 YMR307W 1.28 YGR221C 1.2 YOR372C 1.17 YHR061C 0.82 YDR524C 0.14 YGR109C 0.08 MOTIF 3 total 17 YKL096W-A 5 YDR524C 5 YOR246C 2 YGR109C 2 YGR221C 2 YMR307W 1 MOTIF 3 total 11.51 YDR524C 6.01 YKL096W- 1.95 YMR307W 1.31 YOR246C 0.72 YNL289W 0.62 YGR221C 0.36 YPL256C 0.3 YOR372C 0.24 STB4_S6_G5 MOTIF 1 HAP1 0.62 7 + STB4 1 0 + MOTIF 2 GCR1 0.99 -3 + MET32 0.26 4 + STB4 0 4 - MOTIF 3 DAL80 0.91 -5 - DAL82 0.92 -5 - GLN3 0.46 -5 - GZF3 0.43 -5 - MAC1 0.73 -5 + RGT1 1 -3 - SIP4 0.42 -3 - STB4 0.09 -2 - MOTIF 1 HAP1 0.79 7 - STB4 1 0 - MOTIF 3 DAL80 0.48 -5 + GAL4 0.8 -3 + HAP1 0.32 -4 + MAC1 0.6 -5 - RGT1 1 -3 + SIP4 0.6 -3 + MOTIF 2 SUM1 0.38 -4 + MOTIF 1 a:6 t:5.55 STB4 a:0.83 t:0.89 MOTIF 2 a:3 t:1.97 MOTIF 3 a:6 t:4.14 STB4 a:0.17 t:0.09 MOTIF 1 9 a:14.79 1.64 t:14.12 1.57 ref:9 10.73 1.19 MOTIF 2 9 a:15.49 1.72 t:12.58 1.4 ref:9 10.73 1.19 MOTIF 3 9 a:11.68 1.3 t:10.67 1.19 ref:9 10.73 1.19 YEL020C YBR222C YIL166C YPR129W YBR046C MOTIF 1 total 6 YPR129W 3 YEL020C 1 YBR222C 1 YIL166C 1 MOTIF 1 total 5.55 YPR129W 2.36 YEL020C 0.91 YBR222C 0.91 YIL166C 0.91 YBR046C 0.46 MOTIF 2 total 3 YIL166C 3 MOTIF 2 total 1.97 YIL166C 1.35 YPR129W 0.62 MOTIF 3 total 6 YBR046C 3 YEL020C 1 YBR222C 1 YIL166C 1 MOTIF 3 total 4.14 YBR046C 1.45 YBR222C 1.24 YEL020C 0.72 YIL166C 0.51 YPR129W 0.22 STB5_S15_G12 MOTIF 1 STB5 1 0 + YDR026c 0.87 6 + MOTIF 2 CIN5 0.79 -5 + STB5 0 5 + MOTIF 3 STB5 0.25 6 - MOTIF 1 STB5 1 0 - MOTIF 2 CIN5 0.74 -5 - MOTIF 3 MOTIF 1 a:19 t:13.97 STB5 a:0.74 t:0.62 MOTIF 2 a:6 t:5.58 MOTIF 3 a:13 t:1.1 MOTIF 1 10 a:13.41 1.34 t:13.51 1.35 ref:10 10.73 1.07 MOTIF 2 10 a:15.34 1.53 t:13.15 1.32 ref:10 10.73 1.07 MOTIF 3 10 a:11.41 1.14 t:6.22 0.62 ref:10 10.73 1.07 YHR163W YDL049C YDR231C YMR315W YPL061W YHR183W YNL274C YEL041W YIL160C YLR354C YDR248C YHR178W MOTIF 1 total 19 YHR183W 3 YEL041W 3 YMR315W 2 YPL061W 2 YDR248C 2 YDL049C 1 YHR163W 1 YDR231C 1 YNL274C 1 YIL160C 1 YLR354C 1 YHR178W 1 MOTIF 1 total 13.97 YHR183W 2.73 YEL041W 2.1 YIL160C 1.72 YPL061W 1.59 YDR248C 1.44 YHR163W 0.91 YLR354C 0.91 YDR231C 0.91 YHR178W 0.91 YMR315W 0.48 YNL274C 0.16 YDL049C 0.11 MOTIF 2 total 6 YLR354C 2 YDL049C 1 YPL061W 1 YNL274C 1 YHR178W 1 MOTIF 2 total 5.58 YLR354C 1.76 YPL061W 0.91 YHR178W 0.79 YNL274C 0.75 YMR315W 0.58 YDL049C 0.48 YDR231C 0.26 YDR248C 0.05 MOTIF 3 total 13 YLR354C 4 YDR248C 3 YDL049C 1 YHR163W 1 YDR231C 1 YMR315W 1 YHR183W 1 YPL061W 1 MOTIF 3 total 1.1 YLR354C 0.46 YHR178W 0.18 YNL274C 0.16 YPL061W 0.16 YMR315W 0.14 SUT1_S24_G16 MOTIF 1 DAL80 1 -3 - GAT1 1 -2 - GZF3 0.99 -3 - MSN2 0.78 -6 - SUT1 0 6 - MOTIF 2 SOK2 0.99 -4 - SUT1 0 6 - MOTIF 3 SUT1 0 -4 + MOTIF 2 GAL4 0.39 -6 - LEU3 0.25 6 - PUT3 0.28 14 + SIP4 0.58 -6 - STB5 0.26 -6 - MOTIF 1 NDD1 0.34 9 + MOTIF 3 MOTIF 1 a:16 t:8.07 CIN5 a:0.13 t:0 MOTIF 2 a:21 t:16.63 SOK2 a:0.57 t:0.06 PHD1 a:0.24 t:0.39 SUT1 a:0.05 t:0.31 SKN7 a:0.05 t:0.13 MOTIF 3 a:20 t:13.49 SUT1 a:0.3 t:0.2 PHD1 a:0.3 t:0.3 SOK2 a:0.1 t:0.11 SWI6 a:0.05 t:0.05 SKN7 a:0.05 t:0.14 MOTIF 1 10 a:11.33 1.13 t:8.7 0.87 ref:10 6.94 0.69 MOTIF 2 10 a:10.33 1.03 t:9.15 0.91 ref:10 6.94 0.69 MOTIF 3 10 a:9.9 0.99 t:7.31 0.73 ref:10 6.94 0.69 YPR006C YPL177C YNL178W YDL214C YBL029W YMR135C YKL110C YPR149W YGR249W YGR067C YIL119C YKR075C YBR069C YGL055W YKL063C YOR178C MOTIF 1 total 16 YPL177C 2 YIL119C 2 YKL063C 2 YGL055W 2 YPR149W 2 YBL029W 1 YBR069C 1 YNL178W 1 YKL110C 1 YMR135C 1 YOR178C 1 MOTIF 1 total 8.07 YPR149W 1.76 YGR249W 1.27 YKL063C 0.98 YKR075C 0.9 YIL119C 0.79 YGR067C 0.68 YBR069C 0.64 YBL029W 0.35 YOR178C 0.27 YKL110C 0.17 YNL178W 0.09 YGL055W 0.07 YPL177C 0.05 YDL214C 0.05 MOTIF 2 total 21 YBL029W 6 YIL119C 4 YNL178W 2 YGL055W 2 YMR135C 2 YGR249W 2 YPL177C 1 YKL063C 1 YPR149W 1 MOTIF 2 total 16.63 YMR135C 3.4 YGR249W 3.29 YBL029W 1.85 YKR075C 1.5 YGL055W 1.5 YGR067C 1.39 YKL063C 0.91 YIL119C 0.9 YBR069C 0.88 YKL110C 0.81 YPL177C 0.14 YPR149W 0.06 MOTIF 3 total 20 YKR075C 4 YIL119C 2 YBL029W 2 YKL063C 2 YGL055W 2 YMR135C 2 YGR067C 2 YBR069C 1 YKL110C 1 YPR149W 1 YGR249W 1 MOTIF 3 total 13.49 YMR135C 2.33 YGR249W 2.03 YKR075C 1.8 YBL029W 1.55 YGR067C 1.25 YKL063C 1.24 YGL055W 0.98 YIL119C 0.79 YPR149W 0.65 YKL110C 0.54 YBR069C 0.22 YOR178C 0.11 THI2_S6_G6 MOTIF 1 MCM1 0.31 -7 - MOT3 0.45 2 + NDD1 0.63 -7 - RFX1 0.69 7 + THI2 1 -1 + MOTIF 2 THI2 0 6 + MOTIF 3 ABF1 0.84 -8 - THI2 0 -6 + TYE7 0.49 5 + MOTIF 1 MCM1 0.48 -7 + MOT3 0.53 2 - NDD1 0.73 -7 + RFX1 0.8 7 - THI2 1 -1 - MOTIF 2 MOTIF 3 MOTIF 1 a:5 t:4.61 THI2 a:1 t:1 MOTIF 2 a:6 t:5.96 MOTIF 3 a:4 t:1.17 MOTIF 1 12 a:18.05 1.5 t:18 1.5 ref:12 10.77 0.9 MOTIF 2 12 a:15.6 1.3 t:13.8 1.15 ref:12 10.77 0.9 MOTIF 3 12 a:14.12 1.18 t:12.26 1.02 ref:12 10.77 0.9 YLR004C YDL080C YOL055C YPL214C YBR092C YDR438W MOTIF 1 total 5 YLR004C 1 YDL080C 1 YOL055C 1 YPL214C 1 YBR092C 1 MOTIF 1 total 4.61 YLR004C 0.91 YDL080C 0.91 YOL055C 0.91 YPL214C 0.91 YBR092C 0.91 YDR438W 0.06 MOTIF 2 total 6 YDL080C 3 YPL214C 1 YBR092C 1 YDR438W 1 MOTIF 2 total 5.96 YDL080C 2.45 YDR438W 1.57 YBR092C 1.08 YLR004C 0.41 YOL055C 0.4 YPL214C 0.05 MOTIF 3 total 4 YDL080C 2 YLR004C 1 YOL055C 1 MOTIF 3 total 1.17 YDL080C 0.54 YOL055C 0.37 YLR004C 0.26 YAP1_S13_G12 MOTIF 1 HAP2 0.32 -5 - HAP3 0.65 -5 - HAP5 0.32 -5 - YAP1 0 3 - MOTIF 2 CAD1 0.97 -4 + YAP1 0.93 -5 + YAP6 0.36 3 - YHP1 0.33 -1 - MOTIF 3 YAP1 0 4 - MOTIF 1 GCR1 0.44 -2 + MOTIF 2 CAD1 1 4 + SKO1 0.65 2 + YAP1 1 3 + YAP6 0.39 -5 - MOTIF 3 MOTIF 1 a:10 t:9.95 MOTIF 2 a:13 t:8.59 YAP7 a:0.15 t:0.31 YAP1 a:0.15 t:0.69 HAP1 a:0.08 t:0 CAD1 a:0.08 t:0.25 MOTIF 3 a:7 t:7.95 MOTIF 1 9 a:11.54 1.28 t:8.22 0.91 ref:9 12.11 1.35 MOTIF 2 9 a:9.67 1.07 t:6.65 0.74 ref:9 12.11 1.35 MOTIF 3 9 a:9.36 1.04 t:6.2 0.69 ref:9 12.11 1.35 YJR104C YJL101C YDR084C YNL134C YLR074C YKR052C YBL032W YPL202C YML028W YMR038C YKL086W YGR209C MOTIF 1 total 10 YML028W 2 YJR104C 1 YJL101C 1 YNL134C 1 YKR052C 1 YPL202C 1 YKL086W 1 YGR209C 1 YMR038C 1 MOTIF 1 total 9.95 YJR104C 2.68 YKR052C 1.33 YJL101C 1.13 YMR038C 0.93 YML028W 0.84 YNL134C 0.82 YGR209C 0.65 YKL086W 0.65 YBL032W 0.56 YPL202C 0.36 MOTIF 2 total 13 YJR104C 4 YJL101C 2 YKR052C 2 YDR084C 1 YBL032W 1 YML028W 1 YMR038C 1 YGR209C 1 MOTIF 2 total 8.59 YJR104C 1.14 YMR038C 0.98 YGR209C 0.89 YKR052C 0.88 YJL101C 0.85 YKL086W 0.81 YPL202C 0.75 YML028W 0.58 YLR074C 0.58 YNL134C 0.58 YDR084C 0.39 YBL032W 0.16 MOTIF 3 total 7 YJR104C 4 YBL032W 2 YJL101C 1 MOTIF 3 total 7.95 YJR104C 2.47 YKR052C 0.98 YJL101C 0.92 YBL032W 0.88 YNL134C 0.68 YMR038C 0.51 YML028W 0.47 YGR209C 0.46 YKL086W 0.41 YPL202C 0.17 YAP6_S3_G3 MOTIF 1 MET31 0.37 3 - PHD1 0.28 0 + RDS1 0.71 -2 - SNT2 0.48 -3 - SOK2 0.68 -2 + YAP6 0 3 - MOTIF 2 STB4 0.27 4 - YAP6 0 1 - MOTIF 3 SOK2 0.39 -2 - SWI6 0.58 3 - YAP6 0 3 + MOTIF 3 MOTIF 2 MOTIF 1 MOTIF 1 a:3 t:0.21 UME6 a:0.33 t:0.33 MOTIF 2 a:3 t:0.55 MOTIF 3 a:2 t:1.8 MOTIF 1 7 a:11.4 1.63 t:12.87 1.84 ref:7 12.04 1.72 MOTIF 2 7 a:11.87 1.7 t:13.31 1.9 ref:7 12.04 1.72 MOTIF 3 7 a:13 1.86 t:9.99 1.43 ref:7 12.04 1.72 YGR234W YLR297W YCR021C MOTIF 1 total 3 YLR297W 3 MOTIF 1 total 0.21 YLR297W 0.21 MOTIF 2 total 3 YCR021C 2 YLR297W 1 MOTIF 2 total 0.55 YCR021C 0.55 MOTIF 3 total 2 YLR297W 1 YCR021C 1 MOTIF 3 total 1.8 YLR297W 1.04 YCR021C 0.71 YGR234W 0.05 YDR026c_S10_G10 MOTIF 1 FKH1 0.47 3 + GAL4 0.84 -6 + LEU3 0.63 -5 + PUT3 0.49 14 - REB1 1 -2 - RGT1 0.88 -6 + SIP4 0.8 -6 + STB5 0.89 -6 + YDR026c 1 0 + MOTIF 2 YDR026c 0 6 + MOTIF 3 YDR026c 0 6 - MOTIF 1 FKH1 0.99 3 + GAL4 0.87 -6 + GAL80 0.27 -6 + LEU3 0.83 -5 + PUT3 0.52 14 - REB1 1 -2 - RGT1 0.92 -6 + SIP4 0.83 -6 + STB5 0.93 -6 + YDR026c 1 0 + MOTIF 3 MOTIF 2 MOTIF 1 a:10 t:7.94 YDR026c a:0.9 t:0.96 REB1 a:0.3 t:0.28 MOTIF 2 a:8 t:1.07 MOTIF 3 a:6 t:3.99 GCN4 a:0.17 t:0 MOTIF 1 10 a:15.43 1.54 t:16.31 1.63 ref:10 15.86 1.59 MOTIF 2 10 a:10.45 1.05 t:9.85 0.99 ref:10 15.86 1.59 MOTIF 3 10 a:12.26 1.23 t:6.95 0.7 ref:10 15.86 1.59 YLR459W YBR179C YDL085C-A YFL005W YBR035C YNR012W YGR094W YIL002W-A YEL055C MOTIF 1 total 10 YFL005W 2 YLR459W 1 YBR179C 1 YDL085C-A 1 YBR035C 1 YNR012W 1 YGR094W 1 YIL002W-A 1 YEL055C 1 MOTIF 1 total 7.94 YLR459W 0.91 YBR179C 0.91 YBR035C 0.91 YNR012W 0.91 YGR094W 0.91 YEL055C 0.91 YDL085C- 0.91 YIL002W- 0.87 YFL005W 0.7 MOTIF 2 total 8 YDL085C-A 7 YBR035C 1 MOTIF 2 total 1.07 YBR035C 0.64 YDL085C- 0.28 YFL005W 0.15 MOTIF 3 total 6 YDL085C-A 4 YBR035C 1 YGR094W 1 MOTIF 3 total 3.99 YDL085C- 2.54 YBR035C 1.2 YEL055C 0.12 YGR094W 0.08 YFL005W 0.05 YOX1_S3_G3 MOTIF 1 INO4 0.84 -6 + TEC1 0.3 -8 - YOX1 0 -6 - MOTIF 2 RFX1 0.32 -5 - YOX1 0 -7 + MOTIF 3 AFT2 0.99 -2 - FHL1 1 4 - MAC1 0.56 -4 - MET31 0.4 -8 - MET32 0.75 -8 - RAP1 0.99 3 - RCS1 0.95 -2 - SFP1 0.94 -6 + YOX1 0 -8 - MOTIF 1 INO4 0.82 -6 + TEC1 0.28 -8 - MOTIF 3 AFT2 0.98 -2 + FHL1 0.99 4 + MAC1 0.48 -4 + MET31 0.32 -8 + MET32 0.61 -8 + RAP1 0.98 3 + RCS1 0.93 -2 + SFP1 0.93 -6 - MOTIF 2 MOTIF 1 a:2 t:1.82 YOX1 a:0.5 t:0.5 MOTIF 2 a:4 t:2.86 MOTIF 3 a:2 t:1.95 FHL1 a:0.5 t:0.46 RAP1 a:0.5 t:0.46 MOTIF 1 12 a:21.56 1.8 t:21.56 1.8 ref:12 16.27 1.36 MOTIF 2 12 a:15.77 1.31 t:9.74 0.81 ref:12 16.27 1.36 MOTIF 3 12 a:19.27 1.61 t:17.43 1.45 ref:12 16.27 1.36 YHR151C YGR218W YLR047C MOTIF 1 total 2 YHR151C 1 YLR047C 1 MOTIF 1 total 1.82 YHR151C 0.91 YLR047C 0.91 MOTIF 2 total 4 YHR151C 2 YGR218W 1 YLR047C 1 MOTIF 2 total 2.86 YLR047C 2.59 YGR218W 0.18 YHR151C 0.09 MOTIF 3 total 2 YLR047C 2 MOTIF 3 total 1.95 YLR047C 1.79 YHR151C 0.16