Escher: A Web Application for Building, Sharing, and Embedding Data-Rich Visualizations of Biological Pathways
A) The results of an in silico flux simulation visualized on the reactions. B) Metabolomics data for E. coli aerobic growth visualized on the metabolites. C) RNA-Seq data showing the shift from aerobic to anaerobic conditions in E. coli. Green represents reactions downregulated in anaerobic growth and red represents gene upregulated in anaerobic growth, based on the log2 of the fold change.