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Enhanced Methods for Local Ancestry Assignment in Sequenced Admixed Individuals

Figure 1

Example of CSVs in a 2-way admixed individual (e.g. African American).

Lines denote the true local ancestry while the dots denote CSVs. Different dot types denote the continental ancestry of each CSV. From visual inspection it is relatively easy to discern the true ancestry from the three observed patterns. Spurious CSVs are denoted by CSVs mislabeling the true ancestry state.

Figure 1

doi: https://doi.org/10.1371/journal.pcbi.1003555.g001