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Viral Quasispecies Assembly via Maximal Clique Enumeration

Figure 3

Large deletion estimates.

Estimated deletion size deviation and false negative rate for different true deletion sizes of (A) 100, (B) 500, and (C) 1000 bp. For each deletion length and each coverage of 5, 12, 24, 48, 96, and 144×, a boxplot summarizes the deviations of the estimated to the true deletion size in 100 simulated samples. The blue line represents the number of false negative predicted deletions in each of the 100 samples.

Figure 3

doi: https://doi.org/10.1371/journal.pcbi.1003515.g003