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A Network Approach to Analyzing Highly Recombinant Malaria Parasite Genes

Figure 5

Stochastic block modeling identifies network communities.

HVR 6 is shown in two forms, colored according to the best partition into three communities. (A) A force-directed visualization of the network with the identified communities labeled by color. (B) Adjacency matrix in which the ordering of rows and columns has been permuted to match the inferred communities. Diagonal colored blocks are within-community links, and off-diagonal blocks are between-community links. The matrix is shown symmetrically to aid the eye.

Figure 5