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Using Functional Signatures to Identify Repositioned Drugs for Breast, Myelogenous Leukemia and Prostate Cancer

Figure 1

The comparison of up- or down-regulated genes between each pair of the gene-expression signature from the CMAP and the gene-expression signature from the GEO.

The parameter k indicates the preselected number of up- or down-regulated genes. UC (Top ranking genes in a Cancer type) and UB (Top ranking genes with a Bioactive compound) represent up-regulated genes in the GEO and the CMAP respectively, whereas DC (Botom ranking genes in a Cancer type) and DB (Bottom ranking gene with a Bioactive compound) represent down-regulated genes in the GEO and the CMAPs respectively.

Figure 1

doi: https://doi.org/10.1371/journal.pcbi.1002347.g001