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Near-Native Protein Loop Sampling Using Nonparametric Density Estimation Accommodating Sparcity

Figure 5

Influence of the variation of input data.

RMSD of the best candidate versus average RMSD between all the templates. The data points are classified according to the number of templates used for input in the DPM-HMM φ,ψ density estimation. Grey filled circles represent targets with less than 10 templates, open circles are with 10 to 30 templates and black filled circles are with more than 30 templates.

Figure 5

doi: https://doi.org/10.1371/journal.pcbi.1002234.g005