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One Rule to Grow Them All: A General Theory of Neuronal Branching and Its Practical Application

Figure 7

Validating synthetic branching structures of pyramidal cells.

While branching statistics of starburst amacrine cells and hippocampal granule cells were moderately homogeneous, pyramidal cells exhibited stronger variations. Balancing factors leading to reasonable branching statistics ranged from 0.4 to 0.7. In the following we compare branching parameter distributions as in Figure 4 for synthetic (black) and original dendrites (red) of layer 2/3 (A–C), layer 4 (D–F) and layer 5 (G–I) pyramidal cells grown with a balancing factor bf = 0.7, 0.6 and 0.5 respectively. (K) Representative layer 5 pyramidal cells grown with different balancing factors bf = 0, bf = 0.2, bf = 0.7. (L) Representative electrotonic signatures of these synthetically generated dendrites and of one original layer 5 pyramidal cell for comparison. (M) Simple relationship between electrotonic compartmentalization and balancing factor. Straight line connects averages of each 100 model dendrites at different balancing factor values. Dashed line shows average compartment size of real reconstructions.

Figure 7

doi: https://doi.org/10.1371/journal.pcbi.1000877.g007