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An Evolutionary Model-Based Algorithm for Accurate Phylogenetic Breakpoint Mapping and Subtype Prediction in HIV-1

Figure 8

An example of within-subtype (B) recombination detected by SCUEAL, but not by REGA. A partial reference tree with placed query is shown; color coding is consistent between the similarity plot and the tree.

Figure 8

doi: https://doi.org/10.1371/journal.pcbi.1000581.g008